Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.58□□□□□ -2
TNFRSF1BP20333 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.58□□□□□ -2
TNFRSF1BP20333 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
TNFRSF1BP20333 Y_RNA.143-201ENST00000363520 106 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 RNU6-280P-201ENST00000364145 104 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 Y_RNA.464-201ENST00000384282 110 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 RNU6-318P-201ENST00000384283 103 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AL512633.1-201ENST00000399931 655 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AC023141.4-201ENST00000412031 328 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 CYCSP48-201ENST00000417124 323 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.58□□□□□ -2
TNFRSF1BP20333 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 RPL30P12-201ENST00000474666 353 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 RPS29P26-201ENST00000477483 171 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
TNFRSF1BP20333 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 RN7SKP49-201ENST00000516675 260 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 RNA5SP54-201ENST00000516951 92 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
TNFRSF1BP20333 MIR3133-201ENST00000583157 78 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 MIR3136-201ENST00000583498 78 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.58□□□□□ -2
TNFRSF1BP20333 AC073410.2-201ENST00000603240 332 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AC010900.2-201ENST00000604508 210 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AC005296.1-201ENST00000616145 209 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AP001282.2-201ENST00000616149 309 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 MIR3651-201ENST00000630427 90 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 AL450472.1-202ENST00000637286 180 ntBASIC2.58□□□□□ -2
TNFRSF1BP20333 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.58□□□□□ -2
TNFRSF1BP20333 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
TNFRSF1BP20333 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF1BP20333 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF1BP20333 AL391987.6-201ENST00000305671 199 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNA5SP72-201ENST00000364442 117 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNU4-56P-201ENST00000364700 142 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 Y_RNA.416-201ENST00000384014 113 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 SNORA36A-201ENST00000384221 132 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 MIR10B-201ENST00000385011 110 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 Y_RNA.581-201ENST00000391017 97 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNU6-159P-201ENST00000391080 106 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNU2-49P-201ENST00000410666 184 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AC012306.1-201ENST00000423267 114 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AC004383.1-201ENST00000438135 289 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AC098869.1-201ENST00000481627 292 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNU6-58P-201ENST00000517143 103 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 RNU6-711P-201ENST00000517255 106 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.57□□□□□ -2
TNFRSF1BP20333 MIR5695-201ENST00000579717 85 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 MIR4429-201ENST00000580105 73 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AC008739.3-201ENST00000603262 127 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 YPEL5P2-201ENST00000605553 359 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 AC127459.3-201ENST00000624328 466 ntBASIC2.57□□□□□ -2
TNFRSF1BP20333 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.57□□□□□ -2
TNFRSF1BP20333 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF1BP20333 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.56□□□□□ -2
TNFRSF1BP20333 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TNFRSF1BP20333 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.56□□□□□ -2
TNFRSF1BP20333 snoU2_19.2-201ENST00000363024 80 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORA38.1-201ENST00000364172 131 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 RNU6-338P-201ENST00000383888 105 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 MIR7-3-201ENST00000384898 110 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 MIR147B-201ENST00000390185 80 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORD12B-201ENST00000410433 91 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 RNU6-1077P-201ENST00000410506 102 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AL139156.1-201ENST00000412785 841 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AC019205.3-201ENST00000424573 156 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORA31.1-201ENST00000515993 133 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORA31.5-201ENST00000516190 133 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 Y_RNA.703-201ENST00000516846 111 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 SNORD59.2-201ENST00000516873 68 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 RNU6-56P-201ENST00000516986 93 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AC023824.2-201ENST00000566185 400 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TNFRSF1BP20333 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 RPS15AP11-201ENST00000594193 385 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AC132825.6-201ENST00000638861 357 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 AC010889.1-201ENST00000566193 2666 ntBASIC2.56□□□□□ -2
TNFRSF1BP20333 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TNFRSF1BP20333 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.56□□□□□ -2
TNFRSF1BP20333 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TNFRSF1BP20333 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TNFRSF1BP20333 MIR422A-201ENST00000362286 90 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 Y_RNA.29-201ENST00000362570 113 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 RNA5SP361-201ENST00000362686 118 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 Y_RNA.237-201ENST00000364439 102 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 Y_RNA.352-201ENST00000365439 102 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 RNU6-281P-201ENST00000384212 103 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 MIR215-201ENST00000384858 110 ntBASIC2.55□□□□□ -2
TNFRSF1BP20333 SNORA26.7-201ENST00000391288 122 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms