Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 Y_RNA.286-201ENST00000364813 102 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 Y_RNA.570-201ENST00000384750 101 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 MIR549A-201ENST00000385268 96 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTPN1P18031 SNORA53-201ENST00000391141 249 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 CBX3P9-201ENST00000402326 552 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 RNU2-14P-201ENST00000411053 191 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AL390729.2-201ENST00000416137 156 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AL365496.1-201ENST00000426885 215 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN1P18031 AP001324.2-201ENST00000461163 319 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN1P18031 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN1P18031 CYCSP23-201ENST00000519781 313 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN1P18031 AC011471.1-201ENST00000585766 187 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AL109918.3-201ENST00000603072 338 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 AC107294.3-201ENST00000609211 526 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN1P18031 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN1P18031 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PTPN1P18031 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN1P18031 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN1P18031 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN1P18031 MTND5P35-201ENST00000557537 1720 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 RNY1-201ENST00000364228 113 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 RNU6-245P-201ENST00000384020 107 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 MIR320B2-201ENST00000408479 138 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN1P18031 MTND5P15-201ENST00000434246 349 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 AC007395.1-201ENST00000451333 677 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN1P18031 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 RNU1-143P-201ENST00000516296 146 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN1P18031 AC022080.3-201ENST00000544433 482 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN1P18031 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 U1.23-201ENST00000610293 146 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 RNU1-68P-201ENST00000615382 146 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 U1.39-201ENST00000621562 146 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN1P18031 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN1P18031 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
PTPN1P18031 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN1P18031 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTPN1P18031 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN1P18031 MIR422A-201ENST00000362286 90 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 RNU6-326P-201ENST00000365480 107 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 RNU6-793P-201ENST00000384233 104 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 MIR548I3-201ENST00000408378 149 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 MIR548I1-201ENST00000408810 149 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
PTPN1P18031 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN1P18031 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN1P18031 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 RNU2-31P-201ENST00000516954 155 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN1P18031 AC233702.2-202ENST00000562547 291 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC130289.1-201ENST00000577321 73 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 MIR4325-201ENST00000583049 90 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN1P18031 AC005176.2-201ENST00000596933 147 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 MZT1P2-201ENST00000604387 248 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC037487.3-201ENST00000606668 112 ntBASIC3.29□□□□□ -1.88
PTPN1P18031 AC099654.7-201ENST00000635788 2127 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.28□□□□□ -1.88
PTPN1P18031 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNU1-105P-201ENST00000363470 161 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 Y_RNA.269-201ENST00000364685 89 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNU6-1175P-201ENST00000365200 107 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNU6-209P-201ENST00000384118 107 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNU6-378P-201ENST00000384324 107 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 Y_RNA.569-201ENST00000384749 103 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 MIR186-201ENST00000384988 86 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 SNORD67-201ENST00000390833 111 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 SNORA48.5-201ENST00000391143 135 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 NDUFB4P4-201ENST00000404822 243 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNA5SP201-201ENST00000410316 124 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RN7SKP220-201ENST00000410611 288 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.28□□□□□ -1.88
PTPN1P18031 UQCRBP2-201ENST00000447827 297 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RPL27AP5-201ENST00000469428 449 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 AC074133.1-201ENST00000515696 183 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RNA5SP341-201ENST00000516261 117 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 Y_RNA.700-201ENST00000516806 100 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 RRN3P3-201ENST00000549207 578 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN1P18031 SNRPGP20-201ENST00000604477 205 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 uc_338.14-201ENST00000613162 166 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 AL162274.2-201ENST00000614406 332 ntBASIC3.28□□□□□ -1.88
PTPN1P18031 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 677.7 ms