Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NID1P14543 MIR383-201ENST00000362257 73 ntBASIC3.78□□□□□ -1.8
NID1P14543 SNORD114-19-201ENST00000363072 75 ntBASIC3.78□□□□□ -1.8
NID1P14543 Y_RNA.124-201ENST00000363339 93 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNU4-41P-201ENST00000364426 143 ntBASIC3.78□□□□□ -1.8
NID1P14543 U8.6-201ENST00000364939 135 ntBASIC3.78□□□□□ -1.8
NID1P14543 SNORA62.3-201ENST00000365110 153 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNA5SP283-201ENST00000365604 119 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNU6-484P-201ENST00000384016 107 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNU6-106P-201ENST00000384405 107 ntBASIC3.78□□□□□ -1.8
NID1P14543 MIR554-201ENST00000384874 96 ntBASIC3.78□□□□□ -1.8
NID1P14543 SNORA26.2-201ENST00000390922 122 ntBASIC3.78□□□□□ -1.8
NID1P14543 MIR873-201ENST00000401120 77 ntBASIC3.78□□□□□ -1.8
NID1P14543 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
NID1P14543 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.78□□□□□ -1.8
NID1P14543 RPL23AP82-202ENST00000427528 469 ntBASIC3.78□□□□□ -1.8
NID1P14543 RPL23AP7-203ENST00000449021 469 ntBASIC3.78□□□□□ -1.8
NID1P14543 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.78□□□□□ -1.8
NID1P14543 CENPBD1P1-201ENST00000464061 469 ntBASIC3.78□□□□□ -1.8
NID1P14543 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
NID1P14543 RPL23AP54-201ENST00000495129 419 ntBASIC3.78□□□□□ -1.8
NID1P14543 AC145146.1-201ENST00000496370 254 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNU6-1337P-201ENST00000516525 95 ntBASIC3.78□□□□□ -1.8
NID1P14543 RNU6-928P-201ENST00000516876 104 ntBASIC3.78□□□□□ -1.8
NID1P14543 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 AC034229.5-201ENST00000624258 185 ntBASIC3.78□□□□□ -1.8
NID1P14543 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
NID1P14543 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NID1P14543 AC016588.2-201ENST00000632484 3021 ntBASIC3.78□□□□□ -1.8
NID1P14543 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NID1P14543 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NID1P14543 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NID1P14543 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NID1P14543 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NID1P14543 SNORA60-201ENST00000362396 134 ntBASIC3.77□□□□□ -1.81
NID1P14543 Y_RNA.40-201ENST00000362645 93 ntBASIC3.77□□□□□ -1.81
NID1P14543 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.77□□□□□ -1.81
NID1P14543 RNU6-529P-201ENST00000363383 104 ntBASIC3.77□□□□□ -1.81
NID1P14543 RNU6-294P-201ENST00000364999 102 ntBASIC3.77□□□□□ -1.81
NID1P14543 SNORD116-13-201ENST00000384408 92 ntBASIC3.77□□□□□ -1.81
NID1P14543 RNU6-905P-201ENST00000384434 107 ntBASIC3.77□□□□□ -1.81
NID1P14543 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.77□□□□□ -1.81
NID1P14543 RNA5SP306-201ENST00000411087 107 ntBASIC3.77□□□□□ -1.81
NID1P14543 HSPE1P12-201ENST00000412576 301 ntBASIC3.77□□□□□ -1.81
NID1P14543 AC004552.1-201ENST00000419089 348 ntBASIC3.77□□□□□ -1.81
NID1P14543 HMGN2P20-201ENST00000437531 273 ntBASIC3.77□□□□□ -1.81
NID1P14543 snoU13.14-201ENST00000459372 104 ntBASIC3.77□□□□□ -1.81
NID1P14543 RPS26P3-201ENST00000470205 348 ntBASIC3.77□□□□□ -1.81
NID1P14543 AC084357.1-201ENST00000473404 255 ntBASIC3.77□□□□□ -1.81
NID1P14543 AC090543.2-201ENST00000483963 348 ntBASIC3.77□□□□□ -1.81
NID1P14543 AC004057.1-201ENST00000485827 348 ntBASIC3.77□□□□□ -1.81
NID1P14543 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.77□□□□□ -1.81
NID1P14543 AC011602.1-201ENST00000546484 331 ntBASIC3.77□□□□□ -1.81
NID1P14543 MIR5684-201ENST00000585074 65 ntBASIC3.77□□□□□ -1.81
NID1P14543 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
NID1P14543 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
NID1P14543 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NID1P14543 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NID1P14543 AL159152.1-201ENST00000635019 2587 ntBASIC3.76□□□□□ -1.81
NID1P14543 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NID1P14543 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.76□□□□□ -1.81
NID1P14543 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NID1P14543 RNU6-600P-201ENST00000362524 99 ntBASIC3.76□□□□□ -1.81
NID1P14543 RNU6-19P-201ENST00000384718 107 ntBASIC3.76□□□□□ -1.81
NID1P14543 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
NID1P14543 AL133475.1-201ENST00000404414 305 ntBASIC3.76□□□□□ -1.81
NID1P14543 RN7SKP202-201ENST00000410439 330 ntBASIC3.76□□□□□ -1.81
NID1P14543 RNY4P29-201ENST00000410801 97 ntBASIC3.76□□□□□ -1.81
NID1P14543 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.76□□□□□ -1.81
NID1P14543 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.76□□□□□ -1.81
NID1P14543 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.76□□□□□ -1.81
NID1P14543 AC006445.2-201ENST00000510061 472 ntBASIC3.76□□□□□ -1.81
NID1P14543 SNORA67.7-201ENST00000516664 135 ntBASIC3.76□□□□□ -1.81
NID1P14543 RNA5SP143-201ENST00000516936 115 ntBASIC3.76□□□□□ -1.81
NID1P14543 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.76□□□□□ -1.81
NID1P14543 RPS15AP11-201ENST00000594193 385 ntBASIC3.76□□□□□ -1.81
NID1P14543 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
NID1P14543 AC112484.5-201ENST00000624189 228 ntBASIC3.76□□□□□ -1.81
NID1P14543 MTND5P18-201ENST00000445624 1801 ntBASIC3.76□□□□□ -1.81
NID1P14543 AC007256.1-201ENST00000392253 2765 ntBASIC3.76□□□□□ -1.81
NID1P14543 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NID1P14543 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.76□□□□□ -1.81
NID1P14543 AC068647.1-201ENST00000489539 2265 ntBASIC3.75□□□□□ -1.81
NID1P14543 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.75□□□□□ -1.81
NID1P14543 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.75□□□□□ -1.81
NID1P14543 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.75□□□□□ -1.81
NID1P14543 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.75□□□□□ -1.81
NID1P14543 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NID1P14543 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms