Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AP000763.2-201ENST00000540641 163 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AL360181.4-201ENST00000621752 134 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AC131159.1-201ENST00000621854 213 ntBASIC-1.22□□□□□ -2.6
VCANP13611 SNORD3E-202ENST00000627253 216 ntBASIC-1.22□□□□□ -2.6
VCANP13611 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.22□□□□□ -2.61
VCANP13611 SNORD116-13-201ENST00000384408 92 ntBASIC-1.22□□□□□ -2.61
VCANP13611 MIR487A-201ENST00000385009 80 ntBASIC-1.23□□□□□ -2.61
VCANP13611 USP9YP16-201ENST00000430287 407 ntBASIC-1.23□□□□□ -2.61
VCANP13611 MTND2P5-201ENST00000432656 1006 ntBASIC-1.23□□□□□ -2.61
VCANP13611 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-1.23□□□□□ -2.61
VCANP13611 RPS20P24-201ENST00000457473 361 ntBASIC-1.23□□□□□ -2.61
VCANP13611 AC130509.1-201ENST00000464158 433 ntBASIC-1.23□□□□□ -2.61
VCANP13611 AC097462.1-201ENST00000514125 324 ntBASIC-1.23□□□□□ -2.61
VCANP13611 RNU6-759P-201ENST00000516740 103 ntBASIC-1.23□□□□□ -2.61
VCANP13611 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.23□□□□□ -2.61
VCANP13611 AL391813.1-201ENST00000603098 260 ntBASIC-1.23□□□□□ -2.61
VCANP13611 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-1.23□□□□□ -2.61
VCANP13611 RNU6-819P-201ENST00000364116 107 ntBASIC-1.23□□□□□ -2.61
VCANP13611 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.23□□□□□ -2.61
VCANP13611 AC092953.2-201ENST00000608000 699 ntBASIC-1.23□□□□□ -2.61
VCANP13611 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.23□□□□□ -2.61
VCANP13611 RNU6-343P-201ENST00000364709 104 ntBASIC-1.24□□□□□ -2.61
VCANP13611 RPL21P38-201ENST00000418090 167 ntBASIC-1.24□□□□□ -2.61
VCANP13611 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.24□□□□□ -2.61
VCANP13611 SNRPGP16-201ENST00000533275 226 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AC006199.1-201ENST00000548728 219 ntBASIC-1.24□□□□□ -2.61
VCANP13611 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.24□□□□□ -2.61
VCANP13611 snoU83B.1-201ENST00000517136 88 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AL357078.3-201ENST00000607528 618 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AL355816.1-201ENST00000607951 118 ntBASIC-1.24□□□□□ -2.61
VCANP13611 MIR573-201ENST00000384964 99 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-1.24□□□□□ -2.61
VCANP13611 CR383656.4-201ENST00000546909 122 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AC093875.1-201ENST00000623688 504 ntBASIC-1.24□□□□□ -2.61
VCANP13611 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.24□□□□□ -2.61
VCANP13611 MIR382-201ENST00000637119 76 ntBASIC-1.24□□□□□ -2.61
VCANP13611 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.25□□□□□ -2.61
VCANP13611 FCF1P9-201ENST00000412546 282 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AL365184.2-201ENST00000431139 435 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AC007327.1-201ENST00000447461 264 ntBASIC-1.25□□□□□ -2.61
VCANP13611 MIR3612-201ENST00000579753 87 ntBASIC-1.25□□□□□ -2.61
VCANP13611 GHRLOS.1-201ENST00000610995 70 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AC092104.1-201ENST00000497346 1441 ntBASIC-1.25□□□□□ -2.61
VCANP13611 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.25□□□□□ -2.61
VCANP13611 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.25□□□□□ -2.61
VCANP13611 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.25□□□□□ -2.61
VCANP13611 SMIM11P1-201ENST00000369586 178 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AL139098.1-201ENST00000407291 389 ntBASIC-1.25□□□□□ -2.61
VCANP13611 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-1.25□□□□□ -2.61
VCANP13611 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-1.25□□□□□ -2.61
VCANP13611 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.25□□□□□ -2.61
VCANP13611 MTCYBP43-201ENST00000513621 740 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AL121652.1-201ENST00000608851 448 ntBASIC-1.25□□□□□ -2.61
VCANP13611 RNA5SP259-201ENST00000365541 109 ntBASIC-1.25□□□□□ -2.61
VCANP13611 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.25□□□□□ -2.61
VCANP13611 MIR194-1-201ENST00000384892 85 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AC005042.3-201ENST00000453230 174 ntBASIC-1.25□□□□□ -2.61
VCANP13611 AL139286.2-201ENST00000606838 396 ntBASIC-1.25□□□□□ -2.61
VCANP13611 RNU6-553P-201ENST00000364047 96 ntBASIC-1.26□□□□□ -2.61
VCANP13611 RNA5SP269-201ENST00000459032 137 ntBASIC-1.26□□□□□ -2.61
VCANP13611 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-1.26□□□□□ -2.61
VCANP13611 YWHAEP3-201ENST00000582767 121 ntBASIC-1.26□□□□□ -2.61
VCANP13611 AP005229.2-201ENST00000609980 697 ntBASIC-1.26□□□□□ -2.61
VCANP13611 RNA5SP484-201ENST00000458857 111 ntBASIC-1.26□□□□□ -2.61
VCANP13611 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-1.26□□□□□ -2.61
VCANP13611 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.26□□□□□ -2.61
VCANP13611 AL163051.2-201ENST00000618976 735 ntBASIC-1.26□□□□□ -2.61
VCANP13611 Z77249.1-201ENST00000444622 1175 ntBASIC-1.27□□□□□ -2.61
VCANP13611 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-1.27□□□□□ -2.61
VCANP13611 AP002360.4-201ENST00000606980 481 ntBASIC-1.27□□□□□ -2.61
VCANP13611 RNY3P11-201ENST00000364153 102 ntBASIC-1.27□□□□□ -2.61
VCANP13611 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
VCANP13611 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-1.27□□□□□ -2.61
VCANP13611 AC105417.1-201ENST00000514691 285 ntBASIC-1.27□□□□□ -2.61
VCANP13611 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
VCANP13611 SNORD115-28-201ENST00000363931 81 ntBASIC-1.27□□□□□ -2.61
VCANP13611 RNU6-1293P-201ENST00000384077 107 ntBASIC-1.27□□□□□ -2.61
VCANP13611 USP9YP11-201ENST00000427537 717 ntBASIC-1.27□□□□□ -2.61
VCANP13611 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.27□□□□□ -2.61
VCANP13611 RNU6-156P-201ENST00000621869 107 ntBASIC-1.27□□□□□ -2.61
VCANP13611 MIR507-201ENST00000385234 94 ntBASIC-1.28□□□□□ -2.61
VCANP13611 RAC1P6-201ENST00000423911 575 ntBASIC-1.28□□□□□ -2.61
VCANP13611 MTCYBP27-201ENST00000555160 670 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AC090186.1-201ENST00000605991 572 ntBASIC-1.28□□□□□ -2.61
VCANP13611 5S_rRNA.11-201ENST00000618635 84 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AL138713.1-201ENST00000624026 2130 ntBASIC-1.28□□□□□ -2.61
VCANP13611 SNORD14D-201ENST00000384390 87 ntBASIC-1.28□□□□□ -2.61
VCANP13611 SNORD64-201ENST00000386683 67 ntBASIC-1.28□□□□□ -2.61
VCANP13611 SNORA26-201ENST00000391286 122 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AC119751.3-201ENST00000399720 670 ntBASIC-1.28□□□□□ -2.61
VCANP13611 PRRC2CP1-201ENST00000404428 159 ntBASIC-1.28□□□□□ -2.61
VCANP13611 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.28□□□□□ -2.61
VCANP13611 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.28□□□□□ -2.61
VCANP13611 AC022364.2-201ENST00000457963 554 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AC125232.2-201ENST00000592457 143 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AC098679.4-201ENST00000624241 654 ntBASIC-1.28□□□□□ -2.61
VCANP13611 AC022028.1-201ENST00000412054 408 ntBASIC-1.28□□□□□ -2.62
VCANP13611 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-1.28□□□□□ -2.62
VCANP13611 MEMO1P3-201ENST00000459811 302 ntBASIC-1.28□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms