Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL6A2P12110 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL6A2P12110 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.3□□□□□ -1.88
COL6A2P12110 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL6A2P12110 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL6A2P12110 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
COL6A2P12110 MIR410-201ENST00000362222 80 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 RNU6-655P-201ENST00000362858 107 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 DYNLT3P1-201ENST00000378574 347 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 Y_RNA.446-201ENST00000384178 104 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 Y_RNA.498-201ENST00000384460 102 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 UQCRBP2-201ENST00000447827 297 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 RNU6-625P-201ENST00000459412 107 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.3□□□□□ -1.88
COL6A2P12110 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL6A2P12110 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
COL6A2P12110 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL6A2P12110 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL6A2P12110 UBE2WP1-201ENST00000362030 340 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 U3.9-201ENST00000363823 204 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 Y_RNA.274-201ENST00000364714 101 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 Y_RNA.297-201ENST00000364950 91 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 Y_RNA.331-201ENST00000365267 102 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 RNU6-1310P-201ENST00000384153 107 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 Y_RNA.555-201ENST00000384673 110 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
COL6A2P12110 IFNA11P-201ENST00000446352 526 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AL138752.1-201ENST00000452964 351 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AC005042.3-201ENST00000453230 174 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 COX6CP14-201ENST00000469580 174 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 RPL36AP48-201ENST00000485521 314 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
COL6A2P12110 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.29□□□□□ -1.88
COL6A2P12110 AC055872.1-201ENST00000570978 278 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.29□□□□□ -1.88
COL6A2P12110 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.29□□□□□ -1.88
COL6A2P12110 AL034408.1-202ENST00000636088 415 ntBASIC3.29□□□□□ -1.88
COL6A2P12110 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
COL6A2P12110 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL6A2P12110 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.29□□□□□ -1.88
COL6A2P12110 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC026241.1-201ENST00000517873 2142 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.88
COL6A2P12110 MIR549A-201ENST00000385268 96 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 SNORD17-201ENST00000390930 237 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL6A2P12110 AL603908.1-201ENST00000406098 201 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 MIR1298-201ENST00000408783 112 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
COL6A2P12110 RAB28P5-201ENST00000427490 651 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC112771.1-201ENST00000463581 102 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.28□□□□□ -1.88
COL6A2P12110 AC106707.2-201ENST00000484182 374 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 RNU6-344P-201ENST00000516635 111 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 RN7SKP282-201ENST00000516824 299 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 RN7SKP40-201ENST00000517211 242 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
COL6A2P12110 MIR4282-201ENST00000583613 67 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AL162424.1-201ENST00000602325 221 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC004792.1-201ENST00000614523 137 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 TCL6_2.1-201ENST00000615162 119 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 FTX_2.1-201ENST00000618816 94 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC006001.4-201ENST00000622243 395 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 AC091953.5-201ENST00000622919 233 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
COL6A2P12110 AC009093.8-201ENST00000641769 292 ntBASIC3.28□□□□□ -1.88
COL6A2P12110 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL6A2P12110 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL6A2P12110 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL6A2P12110 Y_RNA.76-201ENST00000362931 109 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 Y_RNA.275-201ENST00000364726 110 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 RNU6-740P-201ENST00000364734 105 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 Y_RNA.383-201ENST00000383855 97 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 Y_RNA.418-201ENST00000384029 102 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 SNORA5A-201ENST00000384111 134 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 MIR483-201ENST00000385070 76 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 RPL19P1-201ENST00000411635 428 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.27□□□□□ -1.89
COL6A2P12110 AC097463.2-201ENST00000421074 142 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 PIGPP3-201ENST00000425307 415 ntBASIC3.27□□□□□ -1.89
COL6A2P12110 MTCO1P5-201ENST00000433573 344 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms