Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.76□□□□□ -1.97
PF4V1P10720 AC233702.2-202ENST00000562547 291 ntBASIC2.76□□□□□ -1.97
PF4V1P10720 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.76□□□□□ -1.97
PF4V1P10720 AC124312.5-201ENST00000604451 268 ntBASIC2.76□□□□□ -1.97
PF4V1P10720 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.76□□□□□ -1.97
PF4V1P10720 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.76□□□□□ -1.97
PF4V1P10720 AL365361.1-201ENST00000566942 3481 ntBASIC2.76□□□□□ -1.97
PF4V1P10720 AC009487.4-201ENST00000624969 3585 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PF4V1P10720 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PF4V1P10720 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PF4V1P10720 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.75□□□□□ -1.97
PF4V1P10720 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PF4V1P10720 RNA5SP267-201ENST00000364893 126 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 Y_RNA.380-201ENST00000365663 111 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 SNORA9-201ENST00000384215 133 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 MIR490-201ENST00000384865 128 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 RNU6-823P-201ENST00000391042 103 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 RN7SKP284-201ENST00000411002 343 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.75□□□□□ -1.97
PF4V1P10720 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.75□□□□□ -1.97
PF4V1P10720 AC025518.1-201ENST00000479856 347 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 RNA5SP137-201ENST00000516833 135 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 RNA5SP380-201ENST00000517190 98 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.75□□□□□ -1.97
PF4V1P10720 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.75□□□□□ -1.97
PF4V1P10720 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.75□□□□□ -1.97
PF4V1P10720 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.75□□□□□ -1.97
PF4V1P10720 AC010205.1-201ENST00000616668 449 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 AL162373.1-201ENST00000620433 407 ntBASIC2.75□□□□□ -1.97
PF4V1P10720 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PF4V1P10720 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PF4V1P10720 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PF4V1P10720 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PF4V1P10720 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PF4V1P10720 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.74□□□□□ -1.97
PF4V1P10720 Y_RNA.455-201ENST00000384230 98 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 RNU6-1160P-201ENST00000384546 104 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 Y_RNA.551-201ENST00000384661 102 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 AL356057.3-201ENST00000402607 340 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 Z92545.1-201ENST00000411782 234 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.74□□□□□ -1.97
PF4V1P10720 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.74□□□□□ -1.97
PF4V1P10720 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.74□□□□□ -1.97
PF4V1P10720 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.74□□□□□ -1.97
PF4V1P10720 AC010469.2-201ENST00000496412 480 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 RNU2-34P-201ENST00000516534 121 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 Y_RNA.713-201ENST00000517013 96 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.74□□□□□ -1.97
PF4V1P10720 MIR4659A-201ENST00000580269 81 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 AC025754.2-201ENST00000606491 432 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 RNVU1-4-201ENST00000612985 164 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 AL357075.2-201ENST00000614906 189 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 AC099654.10-201ENST00000640395 161 ntBASIC2.74□□□□□ -1.97
PF4V1P10720 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PF4V1P10720 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.73□□□□□ -1.97
PF4V1P10720 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PF4V1P10720 RNU4-35P-201ENST00000362588 141 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 RNA5SP42-201ENST00000364278 115 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 SNORD87-201ENST00000364849 89 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 RNU6-975P-201ENST00000384296 105 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 SNORD14D-201ENST00000384390 87 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PF4V1P10720 MIR1252-201ENST00000408861 65 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.73□□□□□ -1.97
PF4V1P10720 BX510359.1-201ENST00000456973 237 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 RN7SL594P-201ENST00000470590 287 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 Y_RNA.715-201ENST00000517082 110 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.73□□□□□ -1.97
PF4V1P10720 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.73□□□□□ -1.97
PF4V1P10720 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.73□□□□□ -1.97
PF4V1P10720 AC240442.1-201ENST00000616055 283 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.73□□□□□ -1.97
PF4V1P10720 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
PF4V1P10720 AC017071.1-201ENST00000564407 2204 ntBASIC2.73□□□□□ -1.97
PF4V1P10720 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PF4V1P10720 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PF4V1P10720 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PF4V1P10720 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PF4V1P10720 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PF4V1P10720 RNU1-33P-201ENST00000364249 162 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.72□□□□□ -1.97
PF4V1P10720 RNU6-1264P-201ENST00000383891 107 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 RNU6-926P-201ENST00000384075 107 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 RNU1-52P-201ENST00000384190 164 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 Y_RNA.471-201ENST00000384312 102 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 MIR606-201ENST00000384851 96 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 MIR29C-201ENST00000385231 88 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PF4V1P10720 RNU6-985P-201ENST00000410182 104 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 TOMM22P2-201ENST00000430735 237 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 AC006028.1-201ENST00000438379 402 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 RNU6-625P-201ENST00000459412 107 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 U8.20-201ENST00000459445 131 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 RN7SL807P-201ENST00000470923 297 ntBASIC2.72□□□□□ -1.97
PF4V1P10720 RN7SL442P-201ENST00000473804 320 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms