Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AC103810.8-201ENST00000607347 118 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.34□□□□□ -2.2
IGHV3-43DP0DP04 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 RNU5B-2P-201ENST00000363036 113 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AL033519.2-201ENST00000403958 392 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AL590002.1-201ENST00000406554 418 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC016907.1-201ENST00000419483 435 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 NCOR1P3-201ENST00000420479 303 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC007395.1-201ENST00000451333 677 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 YWHAEP4-201ENST00000505390 198 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.665-201ENST00000516177 98 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 DEFB131C-201ENST00000528817 165 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 MRPS36P4-201ENST00000534436 298 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC146944.4-201ENST00000602697 718 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC012493.3-201ENST00000604494 112 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 MIR8076-201ENST00000611401 83 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 RMST_3.1-201ENST00000611651 109 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC022513.1-201ENST00000624512 117 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 AC099654.12-201ENST00000639868 649 ntBASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.41-201ENST00000362646 102 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-254P-201ENST00000363377 107 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.132-201ENST00000363421 102 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-128P-201ENST00000383976 107 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.436-201ENST00000384097 102 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.615-201ENST00000410769 117 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 SNRPEP10-201ENST00000420249 274 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 HSPE1P21-201ENST00000438283 308 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC010531.2-201ENST00000465012 153 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 RNU2-44P-201ENST00000516795 194 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AP000889.1-201ENST00000530968 660 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 ZNF519P2-201ENST00000557032 169 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 MIR5094-201ENST00000578766 85 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 CPDP1-201ENST00000579660 283 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 FGF7P1-201ENST00000582820 288 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC016727.2-201ENST00000603988 621 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC010900.2-201ENST00000604508 210 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC104458.1-201ENST00000608243 463 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC083806.3-201ENST00000614016 455 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AC005562.2-201ENST00000618264 111 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 MIR1321-201ENST00000637766 79 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 AL159152.1-201ENST00000635019 2587 ntBASIC1.32□□□□□ -2.2
IGHV3-43DP0DP04 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.38-201ENST00000362617 102 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-545P-201ENST00000362681 104 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-562P-201ENST00000362731 107 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-451P-201ENST00000362921 107 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-1252P-201ENST00000363054 104 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 SNORD113-7-201ENST00000363762 77 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RNY3P3-201ENST00000363816 102 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 RPS26P42-201ENST00000413485 326 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 VN1R36P-201ENST00000414936 291 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MTCO1P20-201ENST00000425366 358 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MTCO3P46-201ENST00000425787 232 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 NDUFA5P4-201ENST00000436704 385 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MTCO1P44-201ENST00000441935 243 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 HMGN2P26-201ENST00000463169 339 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC010409.1-201ENST00000487382 476 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC091435.1-201ENST00000505442 584 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC105313.1-201ENST00000509121 353 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC096745.1-201ENST00000509945 370 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 CBX3P4-201ENST00000538909 354 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC026470.2-201ENST00000561492 181 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 SUB1P4-201ENST00000566062 339 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 CTHRC1P1-201ENST00000605383 469 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MIR3976-201ENST00000606807 139 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC116312.1-201ENST00000606841 314 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AF250324.2-201ENST00000608299 610 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC015540.1-201ENST00000615828 501 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 MTND5P9-201ENST00000503854 1755 ntBASIC1.31□□□□□ -2.2
IGHV3-43DP0DP04 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms