Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC005741.1-201ENST00000511094 432 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 Y_RNA.670-201ENST00000516255 105 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC4P09017 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.79□□□□□ -2.12
HOXC4P09017 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC4P09017 IMMP1LP2-201ENST00000552954 492 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC4P09017 AC100830.2-201ENST00000581636 240 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 MIR4719-201ENST00000585233 84 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 AL355297.2-201ENST00000604792 129 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 AC124303.1-201ENST00000605703 360 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.79□□□□□ -2.12
HOXC4P09017 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC4P09017 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HOXC4P09017 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
HOXC4P09017 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.78□□□□□ -2.12
HOXC4P09017 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-1188P-201ENST00000363795 107 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 Y_RNA.315-201ENST00000365117 102 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-827P-201ENST00000365553 106 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-128P-201ENST00000383976 107 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 Y_RNA.404-201ENST00000383978 102 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-214P-201ENST00000384130 107 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-72P-201ENST00000384285 79 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-43P-201ENST00000384302 107 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-1297P-201ENST00000384415 104 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-601P-201ENST00000384540 107 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNY4P36-201ENST00000391116 96 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AL139396.1-201ENST00000421137 167 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 USP9YP30-201ENST00000430729 455 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 SNAP23P1-201ENST00000433229 246 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AL031274.1-201ENST00000450334 232 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 BTF3P15-201ENST00000455606 336 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.78□□□□□ -2.12
HOXC4P09017 RPL7P42-201ENST00000481005 679 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AC026782.1-201ENST00000512952 449 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-120P-201ENST00000516077 103 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AC069113.1-201ENST00000517763 267 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXC4P09017 TRAV32-201ENST00000553993 340 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 AC103996.1-201ENST00000555468 102 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 MIR3126-201ENST00000577443 74 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXC4P09017 AC007742.2-201ENST00000618226 398 ntBASIC1.78□□□□□ -2.12
HOXC4P09017 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
HOXC4P09017 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXC4P09017 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
HOXC4P09017 MIR369-201ENST00000362155 70 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HOXC4P09017 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HOXC4P09017 RNU6-842P-201ENST00000384269 107 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 Y_RNA.482-201ENST00000384377 111 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 RNU6-310P-201ENST00000384655 107 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HOXC4P09017 MTCYBP4-201ENST00000401524 249 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 Y_RNA.594-201ENST00000410373 140 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 Y_RNA.646-201ENST00000410980 101 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AL117339.3-201ENST00000418733 162 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 UBE2V1P4-201ENST00000425374 344 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC009238.1-201ENST00000442165 424 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC009237.6-201ENST00000446969 424 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC027575.1-201ENST00000481064 460 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC079140.5-201ENST00000507882 310 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXC4P09017 PTP4A1P4-201ENST00000512479 322 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXC4P09017 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXC4P09017 AC093249.1-201ENST00000567049 203 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 MIR4529-201ENST00000578110 78 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXC4P09017 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.77□□□□□ -2.13
HOXC4P09017 AC007229.1-201ENST00000590455 412 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.77□□□□□ -2.13
HOXC4P09017 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXC4P09017 AP000654.2-201ENST00000605633 586 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC009229.3-201ENST00000608056 282 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC126177.8-201ENST00000618339 1015 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AC084768.2-201ENST00000622736 221 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 AL669831.3-213ENST00000636676 183 ntBASIC1.77□□□□□ -2.13
HOXC4P09017 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXC4P09017 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-942P-201ENST00000363002 107 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 Y_RNA.216-201ENST00000364205 93 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-1317P-201ENST00000364582 104 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-474P-201ENST00000384243 107 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-1011P-201ENST00000384668 107 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-331P-201ENST00000384724 107 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 MIR517A-201ENST00000385001 87 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 SNORA75.4-201ENST00000391278 119 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms