Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC091304.9-201ENST00000612091 226 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC011155.2-201ENST00000623202 216 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 SNORD113-6-201ENST00000363345 75 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 MIR208B-201ENST00000401172 77 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC114482.1-201ENST00000418010 247 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AL512286.1-201ENST00000439244 400 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 HMGN1P12-201ENST00000499125 195 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 RN7SKP49-201ENST00000516675 260 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC090572.1-201ENST00000519251 160 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 TPRKBP2-201ENST00000565969 475 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC112191.3-201ENST00000604371 277 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 Z99289.3-201ENST00000605586 594 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC064807.4-201ENST00000607201 407 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC021506.2-201ENST00000612354 169 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC008250.2-201ENST00000615261 205 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AL136221.1-201ENST00000621449 509 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC006927.3-201ENST00000638789 384 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
HLA-DQB2P05538 snoU2-30.2-201ENST00000362805 70 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 RNY1P12-201ENST00000364251 105 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 Y_RNA.367-201ENST00000365544 101 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 MIR300-201ENST00000401138 83 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 MIR1283-1-201ENST00000408494 87 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DQB2P05538 HMGN2P34-201ENST00000437647 269 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AL031274.1-201ENST00000450334 232 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AL009048.1-201ENST00000450437 298 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 MTCO3P7-201ENST00000510008 774 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC022878.1-201ENST00000530684 149 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AL137100.2-201ENST00000555786 315 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC005771.1-201ENST00000585581 349 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC091805.2-201ENST00000603848 235 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AP001836.1-201ENST00000604675 523 ntBASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.62□□□□□ -2.31
HLA-DQB2P05538 AC068700.1-201ENST00000565862 3754 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RNU6-500P-201ENST00000362349 107 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RNU6-562P-201ENST00000362731 107 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RNU4-79P-201ENST00000362764 141 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RPL21P1-201ENST00000399532 476 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC104850.1-201ENST00000435940 476 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 UBE2V1P12-201ENST00000503954 474 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 SNORA31.2-201ENST00000516019 134 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 RNA5SP168-201ENST00000516642 112 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC103996.1-201ENST00000555468 102 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AL929325.1-201ENST00000603096 117 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC016727.2-201ENST00000603988 621 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AC027807.2-201ENST00000616099 408 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AL078595.3-201ENST00000623815 1166 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 AP002371.2-201ENST00000624450 503 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 U6.114-201ENST00000636407 96 ntBASIC0.61□□□□□ -2.31
HLA-DQB2P05538 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-1287P-201ENST00000362914 107 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-827P-201ENST00000365553 106 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-1060P-201ENST00000384664 107 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-910P-201ENST00000390844 107 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-1054P-201ENST00000411293 104 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AL008987.1-201ENST00000415528 237 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC012306.1-201ENST00000423267 114 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AL162395.1-201ENST00000457882 422 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AK3P2-201ENST00000507976 429 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 SNORA25.17-201ENST00000517184 124 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 MIR5695-201ENST00000579717 85 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.6□□□□□ -2.31
HLA-DQB2P05538 MTCO2P2-201ENST00000591258 225 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC022418.1-201ENST00000624118 445 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 AC027514.1-201ENST00000588561 1603 ntBASIC0.6□□□□□ -2.31
HLA-DQB2P05538 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms