Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
APOA1P02647 RNU4-46P-201ENST00000410818 138 ntBASIC0.68□□□□□ -2.3
APOA1P02647 AC098592.1-201ENST00000419352 333 ntBASIC0.68□□□□□ -2.3
APOA1P02647 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.68□□□□□ -2.3
APOA1P02647 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.68□□□□□ -2.3
APOA1P02647 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.68□□□□□ -2.3
APOA1P02647 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.68□□□□□ -2.3
APOA1P02647 MIR5006-201ENST00000583027 110 ntBASIC0.68□□□□□ -2.3
APOA1P02647 RSL24D1P11-201ENST00000591045 491 ntBASIC0.68□□□□□ -2.3
APOA1P02647 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
APOA1P02647 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.68□□□□□ -2.3
APOA1P02647 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.68□□□□□ -2.3
APOA1P02647 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.68□□□□□ -2.3
APOA1P02647 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
APOA1P02647 SNORD70.1-201ENST00000391007 85 ntBASIC0.67□□□□□ -2.3
APOA1P02647 RN7SKP200-201ENST00000410564 320 ntBASIC0.67□□□□□ -2.3
APOA1P02647 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.67□□□□□ -2.3
APOA1P02647 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
APOA1P02647 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.67□□□□□ -2.3
APOA1P02647 AC004386.2-201ENST00000441858 148 ntBASIC0.67□□□□□ -2.3
APOA1P02647 TAF9P1-201ENST00000445421 515 ntBASIC0.67□□□□□ -2.3
APOA1P02647 AC079781.2-201ENST00000446424 169 ntBASIC0.67□□□□□ -2.3
APOA1P02647 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
APOA1P02647 TAF9P2-201ENST00000454958 515 ntBASIC0.67□□□□□ -2.3
APOA1P02647 RNU7-182P-201ENST00000459009 62 ntBASIC0.67□□□□□ -2.3
APOA1P02647 RNU2-69P-201ENST00000516061 100 ntBASIC0.67□□□□□ -2.3
APOA1P02647 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.67□□□□□ -2.3
APOA1P02647 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.67□□□□□ -2.3
APOA1P02647 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.67□□□□□ -2.3
APOA1P02647 MIR4775-201ENST00000581168 75 ntBASIC0.67□□□□□ -2.3
APOA1P02647 GHRLOS.1-201ENST00000610995 70 ntBASIC0.67□□□□□ -2.3
APOA1P02647 AL603839.4-201ENST00000624658 1005 ntBASIC0.67□□□□□ -2.3
APOA1P02647 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.67□□□□□ -2.3
APOA1P02647 RNU6-500P-201ENST00000362349 107 ntBASIC0.66□□□□□ -2.3
APOA1P02647 RNA5SP361-201ENST00000362686 118 ntBASIC0.66□□□□□ -2.3
APOA1P02647 RNU6-266P-201ENST00000364225 107 ntBASIC0.66□□□□□ -2.3
APOA1P02647 RNU6-1029P-201ENST00000384109 107 ntBASIC0.66□□□□□ -2.3
APOA1P02647 MIR454-201ENST00000390180 115 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AP1B1P2-201ENST00000416196 106 ntBASIC0.66□□□□□ -2.3
APOA1P02647 NFU1P2-201ENST00000448700 469 ntBASIC0.66□□□□□ -2.3
APOA1P02647 SNRPFP4-201ENST00000456366 242 ntBASIC0.66□□□□□ -2.3
APOA1P02647 SRRM1P2-201ENST00000464531 1192 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AC079140.5-201ENST00000507882 310 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.66□□□□□ -2.3
APOA1P02647 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AL391840.1-201ENST00000571144 367 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AC146944.4-201ENST00000602697 718 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AC097065.2-201ENST00000608159 533 ntBASIC0.66□□□□□ -2.3
APOA1P02647 MIR6857-201ENST00000613267 93 ntBASIC0.66□□□□□ -2.3
APOA1P02647 SNORD3E-202ENST00000627253 216 ntBASIC0.66□□□□□ -2.3
APOA1P02647 SEPT14P19-203ENST00000633205 211 ntBASIC0.66□□□□□ -2.3
APOA1P02647 AC009541.1-201ENST00000438279 2662 ntBASIC0.65□□□□□ -2.3
APOA1P02647 Y_RNA.111-201ENST00000363248 100 ntBASIC0.65□□□□□ -2.31
APOA1P02647 SNORD113-6-201ENST00000363345 75 ntBASIC0.65□□□□□ -2.31
APOA1P02647 Y_RNA.363-201ENST00000365529 113 ntBASIC0.65□□□□□ -2.31
APOA1P02647 MIR513B-201ENST00000385136 84 ntBASIC0.65□□□□□ -2.31
APOA1P02647 AF228730.1-201ENST00000397972 663 ntBASIC0.65□□□□□ -2.31
APOA1P02647 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
APOA1P02647 SNORA11.2-201ENST00000408318 127 ntBASIC0.65□□□□□ -2.31
APOA1P02647 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.65□□□□□ -2.31
APOA1P02647 GPR143P-201ENST00000434155 205 ntBASIC0.65□□□□□ -2.31
APOA1P02647 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.65□□□□□ -2.31
APOA1P02647 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.65□□□□□ -2.31
APOA1P02647 RPS29P15-201ENST00000458329 171 ntBASIC0.65□□□□□ -2.31
APOA1P02647 RNU6-322P-201ENST00000516010 103 ntBASIC0.65□□□□□ -2.31
APOA1P02647 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.65□□□□□ -2.31
APOA1P02647 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.65□□□□□ -2.31
APOA1P02647 AC026470.2-201ENST00000561492 181 ntBASIC0.65□□□□□ -2.31
APOA1P02647 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
APOA1P02647 AL390123.1-201ENST00000603216 237 ntBASIC0.65□□□□□ -2.31
APOA1P02647 TUSC7.1-201ENST00000610969 165 ntBASIC0.65□□□□□ -2.31
APOA1P02647 TCL6_2.1-201ENST00000615162 119 ntBASIC0.65□□□□□ -2.31
APOA1P02647 MIR8054-201ENST00000620877 86 ntBASIC0.65□□□□□ -2.31
APOA1P02647 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
APOA1P02647 MIR620-201ENST00000385232 95 ntBASIC0.64□□□□□ -2.31
APOA1P02647 SNORA16.2-201ENST00000390991 127 ntBASIC0.64□□□□□ -2.31
APOA1P02647 RPL17P50-201ENST00000396131 546 ntBASIC0.64□□□□□ -2.31
APOA1P02647 RNU6-57P-201ENST00000411348 103 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.64□□□□□ -2.31
APOA1P02647 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.64□□□□□ -2.31
APOA1P02647 AC074290.1-201ENST00000448883 135 ntBASIC0.64□□□□□ -2.31
APOA1P02647 ZNF114P1-201ENST00000453500 292 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.64□□□□□ -2.31
APOA1P02647 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
APOA1P02647 RNU1-142P-201ENST00000516682 145 ntBASIC0.64□□□□□ -2.31
APOA1P02647 CBX3P8-201ENST00000532412 525 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
APOA1P02647 AF131215.7-201ENST00000602443 707 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AL158827.2-201ENST00000602494 330 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AC022217.4-201ENST00000604389 163 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AC005858.4-201ENST00000623191 700 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AP002371.2-201ENST00000624450 503 ntBASIC0.64□□□□□ -2.31
APOA1P02647 AL691447.3-201ENST00000635020 330 ntBASIC0.64□□□□□ -2.31
APOA1P02647 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
APOA1P02647 RNU6-1305P-201ENST00000364353 104 ntBASIC0.63□□□□□ -2.31
APOA1P02647 RNA5SP126-201ENST00000365092 109 ntBASIC0.63□□□□□ -2.31
APOA1P02647 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
APOA1P02647 RNU6-74P-201ENST00000384235 107 ntBASIC0.63□□□□□ -2.31
APOA1P02647 Y_RNA.598-201ENST00000410480 95 ntBASIC0.63□□□□□ -2.31
APOA1P02647 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms