Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MTND4P12-201ENST00000498999 1377 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 AP000568.1-201ENST00000282964 442 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 OR4G2P-201ENST00000328113 903 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU4-15P-201ENST00000362613 141 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-655P-201ENST00000362858 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-78P-201ENST00000362897 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 Y_RNA.132-201ENST00000363421 102 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-743P-201ENST00000364151 106 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-378P-201ENST00000384324 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 SNORD116-8-201ENST00000384365 95 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-939P-201ENST00000384634 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 MIR29B2-201ENST00000385055 81 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-1106P-201ENST00000390845 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 BTF3L4P2-201ENST00000392798 346 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU2-9P-201ENST00000410194 145 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 RNU6-248P-201ENST00000410720 107 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.82□□□□□ -2.28
COL4A1P02462 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC245102.2-201ENST00000448956 180 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC006026.2-201ENST00000457376 180 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 MTCO3P38-201ENST00000468910 766 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.82□□□□□ -2.28
COL4A1P02462 Y_RNA.717-201ENST00000517106 92 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC060788.1-201ENST00000521318 469 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.82□□□□□ -2.28
COL4A1P02462 RRN3P3-201ENST00000549207 578 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 MTCYBP33-201ENST00000575007 1130 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC008752.3-201ENST00000588113 712 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC005786.1-201ENST00000588553 154 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC091805.2-201ENST00000603848 235 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.82□□□□□ -2.28
COL4A1P02462 AC008536.2-201ENST00000607284 349 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC006566.1-201ENST00000608943 513 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC004223.4-201ENST00000612426 332 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AL354950.2-201ENST00000617939 290 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AL627230.5-201ENST00000619807 58 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 AC124864.2-201ENST00000624736 186 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 MTND4P14-201ENST00000435799 1354 ntBASIC0.82□□□□□ -2.28
COL4A1P02462 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.82□□□□□ -2.28
COL4A1P02462 SNORD115-3-201ENST00000363100 82 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNA5SP493-201ENST00000364115 91 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU4-66P-201ENST00000365199 138 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-282P-201ENST00000365357 103 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Y_RNA.471-201ENST00000384312 102 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-360P-201ENST00000390944 104 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNA5SP127-201ENST00000411051 133 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 MTATP6P18-201ENST00000417994 673 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 MTCO2P34-201ENST00000421994 607 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 PRPS1P1-201ENST00000445305 876 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A1P02462 MTND1P27-201ENST00000451117 902 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A1P02462 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 RPS29P15-201ENST00000458329 171 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-261P-201ENST00000459506 102 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 SNRPGP7-201ENST00000469016 106 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC022447.4-201ENST00000504053 364 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 MTCO3P28-201ENST00000513351 515 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-667P-201ENST00000517186 102 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 MTND4P7-201ENST00000523876 130 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 COPS8P3-201ENST00000526024 482 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 MIR4703-201ENST00000577728 79 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 MIR3923-201ENST00000579521 83 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 BNIP3P25-201ENST00000596023 559 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AL451064.1-201ENST00000607718 471 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Z69908.1-201ENST00000622603 247 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC005609.4-201ENST00000625071 447 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC090517.3-201ENST00000625170 141 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 ELL2P3-201ENST00000457883 1602 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-212P-201ENST00000362642 104 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Y_RNA.201-201ENST00000364052 96 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Y_RNA.274-201ENST00000364714 101 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Y_RNA.367-201ENST00000365544 101 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL4A1P02462 RNU6-606P-201ENST00000384721 111 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A1P02462 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 CDK8P2-201ENST00000415020 547 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 C1DP2-201ENST00000418167 426 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 NCOR1P3-201ENST00000420479 303 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC244670.1-201ENST00000436879 112 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.81□□□□□ -2.28
COL4A1P02462 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 MTND3P16-201ENST00000452205 344 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RPS27AP8-201ENST00000452665 445 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC022364.2-201ENST00000457963 554 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 MTCO2P6-201ENST00000463134 685 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 RPS23P5-201ENST00000495419 428 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC109479.2-201ENST00000517842 174 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AL356057.1-201ENST00000533798 831 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC018630.3-201ENST00000542637 96 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms