Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.02□□□□□ -1.93
COL3A1P02461 RNU7-87P-201ENST00000459343 62 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 RPL37P6-202ENST00000464216 403 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 SUMO2P6-201ENST00000505273 288 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.02□□□□□ -1.93
COL3A1P02461 MRPS36P4-201ENST00000534436 298 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AC010186.2-204ENST00000537668 439 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AC104581.2-201ENST00000572227 430 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 MIR4643-201ENST00000577473 78 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AC010297.1-201ENST00000623948 149 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 U6.92-201ENST00000636464 89 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AC009487.2-201ENST00000420969 6821 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL3A1P02461 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL3A1P02461 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL3A1P02461 AC007785.2-201ENST00000598627 1916 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.01□□□□□ -1.93
COL3A1P02461 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL3A1P02461 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 SNORD50.1-201ENST00000362987 71 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 Y_RNA.541-201ENST00000384640 113 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 snoU13.3-201ENST00000459441 104 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 RPL23AP49-201ENST00000492925 468 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 SEPT14P8-201ENST00000508026 178 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 RNU6-1278P-201ENST00000516130 107 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 Y_RNA.706-201ENST00000516933 99 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 AC109479.2-201ENST00000517842 174 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 AC024405.2-202ENST00000532731 184 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.01□□□□□ -1.93
COL3A1P02461 AC025754.2-201ENST00000606491 432 ntBASIC3.01□□□□□ -1.93
COL3A1P02461 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
COL3A1P02461 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
COL3A1P02461 SNORD113-8-201ENST00000363497 74 ntBASIC3□□□□□ -1.93
COL3A1P02461 RNU6-512P-201ENST00000364438 103 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.405-201ENST00000383979 100 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.451-201ENST00000384200 100 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.524-201ENST00000384564 100 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.561-201ENST00000384694 100 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.602-201ENST00000410535 92 ntBASIC3□□□□□ -1.93
COL3A1P02461 COX6CP10-201ENST00000416832 224 ntBASIC3□□□□□ -1.93
COL3A1P02461 RPS27AP9-201ENST00000477681 438 ntBASIC3□□□□□ -1.93
COL3A1P02461 Y_RNA.683-201ENST00000516508 93 ntBASIC3□□□□□ -1.93
COL3A1P02461 CASP1P1-201ENST00000526345 212 ntBASIC3□□□□□ -1.93
COL3A1P02461 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
COL3A1P02461 MIR3670-2-201ENST00000582974 65 ntBASIC3□□□□□ -1.93
COL3A1P02461 MIR3670-1-201ENST00000584160 65 ntBASIC3□□□□□ -1.93
COL3A1P02461 MIR3670-3-201ENST00000584855 65 ntBASIC3□□□□□ -1.93
COL3A1P02461 MIR3670-4-201ENST00000612260 65 ntBASIC3□□□□□ -1.93
COL3A1P02461 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL3A1P02461 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.99□□□□□ -1.93
COL3A1P02461 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.99□□□□□ -1.93
COL3A1P02461 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL3A1P02461 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.99□□□□□ -1.93
COL3A1P02461 RNU1-51P-201ENST00000365345 176 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 RNU1-73P-201ENST00000383971 164 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 MIR613-201ENST00000385248 95 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 RNA5SP425-201ENST00000410336 112 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 RNU6-1025P-201ENST00000410629 104 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.99□□□□□ -1.93
COL3A1P02461 AK3P2-201ENST00000507976 429 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL3A1P02461 MIR4648-201ENST00000580107 72 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 AC004832.4-201ENST00000608952 331 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 AC240442.1-201ENST00000616055 283 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.99□□□□□ -1.93
COL3A1P02461 AC009831.4-201ENST00000620744 325 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 AC097372.5-201ENST00000623665 376 ntBASIC2.99□□□□□ -1.93
COL3A1P02461 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.99□□□□□ -1.93
COL3A1P02461 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL3A1P02461 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL3A1P02461 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
COL3A1P02461 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL3A1P02461 RNU4-90P-201ENST00000362773 141 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 RNU6-682P-201ENST00000363843 106 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 SNORA53-201ENST00000391141 249 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 RNU2-20P-201ENST00000410425 191 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.98□□□□□ -1.93
COL3A1P02461 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.98□□□□□ -1.93
COL3A1P02461 MTATP6P4-201ENST00000427725 675 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AC079354.2-201ENST00000453523 154 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.98□□□□□ -1.93
COL3A1P02461 COX6CP14-201ENST00000469580 174 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AL049830.2-201ENST00000480072 201 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AC108210.2-201ENST00000503681 201 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 RNU6-1012P-201ENST00000516606 109 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 RNU6-861P-201ENST00000516745 106 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 RNU6-612P-201ENST00000516909 102 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.98□□□□□ -1.93
COL3A1P02461 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.98□□□□□ -1.93
COL3A1P02461 AC004486.1-201ENST00000546846 233 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AC103996.1-201ENST00000555468 102 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AC105137.2-201ENST00000569073 466 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 SNORD84-203ENST00000584275 78 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 AC072026.1-201ENST00000605023 201 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 U2.14-201ENST00000615943 113 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 MIR7111-201ENST00000619751 72 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL3A1P02461 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms