Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC104576.1-201ENST00000524225 88 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 MIR4513-201ENST00000581077 86 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RPL17P51-201ENST00000605218 238 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 CTHRC1P1-201ENST00000605383 469 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU6-89P-201ENST00000606519 100 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC092954.2-201ENST00000609103 430 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 RNU6-1042P-201ENST00000384204 107 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 RNU6-1106P-201ENST00000390845 107 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 SNORD37.1-201ENST00000390968 65 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 RNU2-16P-201ENST00000410712 136 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 ARL5AP1-201ENST00000418991 388 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 MTND3P9-201ENST00000429526 346 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC099677.2-201ENST00000436385 175 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 snoU13.6-201ENST00000458785 104 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 SNORA19.2-201ENST00000516013 114 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 RNU5F-4P-201ENST00000516581 114 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 SNORA44.1-201ENST00000517031 108 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC090517.1-201ENST00000569307 266 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC100830.2-201ENST00000581636 240 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC016925.2-201ENST00000605108 242 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AL357078.3-201ENST00000607528 618 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC073534.2-201ENST00000620377 381 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC068205.3-201ENST00000636385 468 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 AC068137.3-201ENST00000639191 341 ntBASIC1.17□□□□□ -2.22
HLA-DQB1P01920 RNU6-661P-201ENST00000362409 107 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-562P-201ENST00000362731 107 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 Y_RNA.231-201ENST00000364358 102 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-60P-201ENST00000364792 103 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-438P-201ENST00000365561 103 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-1286P-201ENST00000383871 107 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-338P-201ENST00000383888 105 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-439P-201ENST00000384188 106 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 EIF4E2P1-201ENST00000393781 255 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-908P-201ENST00000410160 94 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNU6-1068P-201ENST00000410958 103 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RPS26P42-201ENST00000413485 326 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 Z83846.1-201ENST00000446798 265 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AC107401.1-201ENST00000503426 685 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 FAM206BP-201ENST00000510179 541 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 MRPS36P4-201ENST00000534436 298 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 FGF7P1-201ENST00000582820 288 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AC116312.1-201ENST00000606841 314 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AC004492.1-201ENST00000607036 742 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 AC104458.1-201ENST00000608243 463 ntBASIC1.16□□□□□ -2.22
HLA-DQB1P01920 FER-210ENST00000628534 558 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB1P01920 RNA5SP126-201ENST00000365092 109 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 RNU6-1093P-201ENST00000391194 107 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 RNU6-325P-201ENST00000411132 105 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 USP9YP28-201ENST00000435142 589 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC007395.1-201ENST00000451333 677 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 RPS23P5-201ENST00000495419 428 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 YWHAEP4-201ENST00000505390 198 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC097473.1-201ENST00000508142 408 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC116337.1-201ENST00000509680 687 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC024909.2-201ENST00000553035 286 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 MIR5094-201ENST00000578766 85 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AC016727.2-201ENST00000603988 621 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQB1P01920 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.15□□□□□ -2.23
HLA-DQB1P01920 MIR424-201ENST00000362227 98 ntBASIC1.14□□□□□ -2.23
HLA-DQB1P01920 Y_RNA.41-201ENST00000362646 102 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms