Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC105758.1-201ENST00000506038 399 ntBASIC2.48□□□□□ -2.01
LDLRP01130 MRPS35P2-201ENST00000508242 191 ntBASIC2.48□□□□□ -2.01
LDLRP01130 SCARNA11.3-201ENST00000517276 130 ntBASIC2.48□□□□□ -2.01
LDLRP01130 RNU1-104P-201ENST00000517280 175 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.48□□□□□ -2.01
LDLRP01130 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.48□□□□□ -2.01
LDLRP01130 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.48□□□□□ -2.01
LDLRP01130 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
LDLRP01130 RPS15AP11-201ENST00000594193 385 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC009314.1-201ENST00000603871 304 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC011373.1-201ENST00000607270 237 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.48□□□□□ -2.01
LDLRP01130 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.48□□□□□ -2.01
LDLRP01130 AL359854.1-201ENST00000614203 1594 ntBASIC2.48□□□□□ -2.01
LDLRP01130 MAPK10-266ENST00000641066 6555 ntBASIC2.48□□□□□ -2.01
LDLRP01130 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LDLRP01130 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
LDLRP01130 Y_RNA.48-201ENST00000362710 103 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-596P-201ENST00000365395 98 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-622P-201ENST00000384272 103 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
LDLRP01130 MIR544A-201ENST00000384855 91 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-1245P-201ENST00000411130 106 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AL030996.1-201ENST00000411430 235 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC009310.1-201ENST00000414414 451 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.47□□□□□ -2.01
LDLRP01130 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.47□□□□□ -2.01
LDLRP01130 USP9YP16-201ENST00000430287 407 ntBASIC2.47□□□□□ -2.01
LDLRP01130 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.47□□□□□ -2.01
LDLRP01130 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
LDLRP01130 USP9YP23-201ENST00000455085 407 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-1037P-201ENST00000459571 107 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.47□□□□□ -2.01
LDLRP01130 AC018437.1-201ENST00000492214 406 ntBASIC2.47□□□□□ -2.01
LDLRP01130 RPL22P13-201ENST00000493291 347 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 RNU6-475P-201ENST00000516073 104 ntBASIC2.47□□□□□ -2.01
LDLRP01130 SNORA31.18-201ENST00000517043 134 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.47□□□□□ -2.01
LDLRP01130 TRAV32-201ENST00000553993 340 ntBASIC2.47□□□□□ -2.01
LDLRP01130 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
LDLRP01130 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.47□□□□□ -2.01
LDLRP01130 AL021879.1-201ENST00000611756 288 ntBASIC2.47□□□□□ -2.01
LDLRP01130 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 AC241585.2-209ENST00000638217 143 ntBASIC2.47□□□□□ -2.01
LDLRP01130 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
LDLRP01130 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
LDLRP01130 Z75746.1-201ENST00000440243 2080 ntBASIC2.46□□□□□ -2.01
LDLRP01130 ZNF72P-201ENST00000425869 1908 ntBASIC2.46□□□□□ -2.02
LDLRP01130 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LDLRP01130 RNU6-1317P-201ENST00000364582 104 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RNU6-99P-201ENST00000364721 107 ntBASIC2.46□□□□□ -2.02
LDLRP01130 Y_RNA.307-201ENST00000365022 117 ntBASIC2.46□□□□□ -2.02
LDLRP01130 Y_RNA.396-201ENST00000383949 103 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RNU6-472P-201ENST00000384299 107 ntBASIC2.46□□□□□ -2.02
LDLRP01130 Y_RNA.476-201ENST00000384347 108 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RNU6-101P-201ENST00000410323 104 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC243964.1-201ENST00000441814 261 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC007969.2-201ENST00000441891 191 ntBASIC2.46□□□□□ -2.02
LDLRP01130 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.46□□□□□ -2.02
LDLRP01130 PCNPP5-201ENST00000452246 481 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RPS29P21-201ENST00000496272 170 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.46□□□□□ -2.02
LDLRP01130 AC096725.1-201ENST00000514266 313 ntBASIC2.46□□□□□ -2.02
LDLRP01130 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RNU6-264P-201ENST00000517134 104 ntBASIC2.46□□□□□ -2.02
LDLRP01130 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.46□□□□□ -2.02
LDLRP01130 CPDP1-201ENST00000579660 283 ntBASIC2.46□□□□□ -2.02
LDLRP01130 MIR3199-1-201ENST00000582434 88 ntBASIC2.46□□□□□ -2.02
LDLRP01130 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC005899.2-201ENST00000584353 90 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.46□□□□□ -2.02
LDLRP01130 AC096772.1-201ENST00000609146 564 ntBASIC2.46□□□□□ -2.02
LDLRP01130 AC024581.2-201ENST00000619986 252 ntBASIC2.46□□□□□ -2.02
LDLRP01130 MIR4272-201ENST00000635924 64 ntBASIC2.46□□□□□ -2.02
LDLRP01130 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.02
LDLRP01130 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
LDLRP01130 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LDLRP01130 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LDLRP01130 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.45□□□□□ -2.02
LDLRP01130 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LDLRP01130 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LDLRP01130 SNORD114-19-201ENST00000363072 75 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RNY3P11-201ENST00000364153 102 ntBASIC2.45□□□□□ -2.02
LDLRP01130 Y_RNA.222-201ENST00000364264 102 ntBASIC2.45□□□□□ -2.02
LDLRP01130 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RPL21P1-201ENST00000399532 476 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RPS29P13-201ENST00000402041 169 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RNU6-325P-201ENST00000411132 105 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RPL23AP50-201ENST00000434149 455 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC099799.1-201ENST00000439809 192 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC124916.1-201ENST00000444020 547 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.45□□□□□ -2.02
LDLRP01130 PCMTD1P1-201ENST00000455560 355 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms