Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-58P-201ENST00000517143 103 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-2O95096 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-2O95096 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 MIR3162-201ENST00000581818 82 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-2O95096 C8orf59P2-201ENST00000603441 271 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NKX2-2O95096 AL365361.1-201ENST00000566942 3481 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
NKX2-2O95096 RNU4-79P-201ENST00000362764 141 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 RNU6-525P-201ENST00000363685 104 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 RNU1-91P-201ENST00000364746 163 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 SNORA18.2-201ENST00000383865 132 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 RNU6-700P-201ENST00000391043 107 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AL357139.1-201ENST00000407792 426 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC022028.1-201ENST00000412054 408 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.24□□□□□ -2.05
NKX2-2O95096 AC027124.2-201ENST00000428249 105 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-2O95096 AC236972.2-201ENST00000434979 310 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 RPL30P15-201ENST00000457129 321 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 PRELID3BP1-201ENST00000457142 540 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.24□□□□□ -2.05
NKX2-2O95096 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-2O95096 Y_RNA.706-201ENST00000516933 99 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC026271.5-201ENST00000577873 130 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.24□□□□□ -2.05
NKX2-2O95096 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-2O95096 MIR4795-201ENST00000584182 89 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 TCL6_2.1-201ENST00000615162 119 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 AC010297.1-201ENST00000623948 149 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.24□□□□□ -2.05
NKX2-2O95096 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
NKX2-2O95096 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NKX2-2O95096 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX2-2O95096 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX2-2O95096 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX2-2O95096 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX2-2O95096 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 RNU6-245P-201ENST00000384020 107 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NKX2-2O95096 RPL23AP50-201ENST00000434149 455 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 AL137159.1-201ENST00000452808 512 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 AL139109.1-201ENST00000455491 297 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 TOMM22P6-201ENST00000465035 409 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 RPS23P5-201ENST00000495419 428 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-2O95096 AC008549.1-201ENST00000512900 643 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 RNU5F-4P-201ENST00000516581 114 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-2O95096 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 SUB1P3-201ENST00000564581 315 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 SNRPGP20-201ENST00000604477 205 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 AL355802.3-201ENST00000607571 545 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.23□□□□□ -2.05
NKX2-2O95096 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX2-2O95096 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX2-2O95096 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 ZNF204P-201ENST00000416749 2397 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
NKX2-2O95096 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-2O95096 Y_RNA.58-201ENST00000362807 102 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 Y_RNA.154-201ENST00000363624 102 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNU6-743P-201ENST00000364151 106 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNY3P1-201ENST00000365085 102 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNY3-201ENST00000365484 102 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 Y_RNA.509-201ENST00000384506 99 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNU6-159P-201ENST00000391080 106 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 MIR190B-201ENST00000401119 79 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 MIR320B2-201ENST00000408479 138 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-2O95096 AF228730.4-201ENST00000421457 183 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 MTND3P23-201ENST00000431980 347 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC009237.7-201ENST00000447357 229 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 HMGN2P18-201ENST00000450680 270 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-2O95096 AC093259.1-201ENST00000509755 300 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 ATP5EP1-201ENST00000510257 156 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC093303.1-201ENST00000514549 295 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNU2-44P-201ENST00000516795 194 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 RNA5SP490-201ENST00000517141 136 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-2O95096 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.22□□□□□ -2.05
NKX2-2O95096 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-2O95096 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC126177.8-201ENST00000618339 1015 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 AC104985.2-201ENST00000620598 500 ntBASIC2.22□□□□□ -2.05
NKX2-2O95096 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
NKX2-2O95096 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-2O95096 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
NKX2-2O95096 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
NKX2-2O95096 Y_RNA.332-201ENST00000365271 113 ntBASIC2.21□□□□□ -2.06
NKX2-2O95096 Y_RNA.577-201ENST00000384794 101 ntBASIC2.21□□□□□ -2.06
NKX2-2O95096 MIR549A-201ENST00000385268 96 ntBASIC2.21□□□□□ -2.06
NKX2-2O95096 RNU1-139P-201ENST00000391307 165 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms