Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK3AO75631 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3AO75631 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
UPK3AO75631 RNU6-82P-201ENST00000363970 107 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 RNU6-1322P-201ENST00000364309 107 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 RNU4-20P-201ENST00000365601 151 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 RNU6-38P-201ENST00000384085 107 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 RNU6-1026P-201ENST00000384465 108 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 SNORA12.2-201ENST00000391040 156 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.39□□□□□ -2.19
UPK3AO75631 AC096745.1-201ENST00000509945 370 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 MTND2P38-201ENST00000522536 667 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3AO75631 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3AO75631 AC069114.2-201ENST00000604699 304 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 AL158209.2-201ENST00000619266 216 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 AL136221.1-201ENST00000621449 509 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 MTND5P26-201ENST00000426018 1752 ntBASIC1.39□□□□□ -2.19
UPK3AO75631 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UPK3AO75631 MIR340-201ENST00000362125 95 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 RNU6-227P-201ENST00000362865 103 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 SNORD31B-201ENST00000364977 69 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 SNORD116-1-201ENST00000384335 95 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
UPK3AO75631 TIMM9P3-201ENST00000428659 274 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3AO75631 RNU6-261P-201ENST00000459506 102 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AC007547.1-201ENST00000462177 490 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 SRRM1P2-201ENST00000464531 1192 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK3AO75631 AC025465.4-201ENST00000513422 638 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 SNORA19.2-201ENST00000516013 114 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 RNU6-1069P-201ENST00000516612 133 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 RNU6-405P-201ENST00000516637 110 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AP001485.1-201ENST00000604799 199 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AC064807.4-201ENST00000607201 407 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3AO75631 AC068792.1-201ENST00000621354 417 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
UPK3AO75631 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UPK3AO75631 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPK3AO75631 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UPK3AO75631 RNU6-1085P-201ENST00000363576 107 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 RNU6-1329P-201ENST00000365664 107 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 RNU6-259P-201ENST00000383999 107 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 MIR520A-201ENST00000384862 85 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 RNU2-7P-201ENST00000410794 178 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK3AO75631 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3AO75631 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK3AO75631 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK3AO75631 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC245517.4-201ENST00000448601 281 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC007395.1-201ENST00000451333 677 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 U8.21-201ENST00000459536 136 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 RPL9P9-202ENST00000466501 579 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 RPS23P5-201ENST00000495419 428 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 Y_RNA.654-201ENST00000497848 106 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.37□□□□□ -2.19
UPK3AO75631 AP005136.1-201ENST00000579765 429 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 MIR5692C1-201ENST00000585309 91 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC009994.1-201ENST00000606889 253 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC092807.2-201ENST00000609367 243 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC005520.5-201ENST00000613926 164 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.37□□□□□ -2.19
UPK3AO75631 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPK3AO75631 Y_RNA.51-201ENST00000362725 102 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RNU1-76P-201ENST00000362903 159 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RNU6-1317P-201ENST00000364582 104 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 Y_RNA.481-201ENST00000384373 102 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RNU6-360P-201ENST00000390944 104 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RNU2-66P-201ENST00000410650 161 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 USP9YP14-201ENST00000430663 563 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 MRPS10P2-201ENST00000431226 381 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK3AO75631 ATP5J2P3-201ENST00000451550 258 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RPS29P27-201ENST00000463711 170 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 AC083806.3-201ENST00000614016 455 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.36□□□□□ -2.19
UPK3AO75631 FER-210ENST00000628534 558 ntTSL 5 BASIC1.36□□□□□ -2.19
UPK3AO75631 OR5AK4P-201ENST00000635912 903 ntBASIC1.36□□□□□ -2.19
UPK3AO75631 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
UPK3AO75631 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK3AO75631 AL159152.1-201ENST00000635019 2587 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
UPK3AO75631 Y_RNA.123-201ENST00000363338 102 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms