Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CLDN11O75508 ICE2P2-201ENST00000483823 2787 ntBASIC1.21□□□□□ -2.22
CLDN11O75508 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLDN11O75508 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 RNU6-1093P-201ENST00000391194 107 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC245047.4-201ENST00000433189 144 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN11O75508 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN11O75508 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN11O75508 AL031667.1-201ENST00000440222 725 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN11O75508 RNU7-63P-201ENST00000459054 62 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 RNU7-138P-201ENST00000459479 64 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AL163973.1-201ENST00000484753 577 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC010486.2-201ENST00000505572 483 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN11O75508 RNA5SP481-201ENST00000516814 122 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN11O75508 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.2□□□□□ -2.22
CLDN11O75508 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN11O75508 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 MIR8063-201ENST00000621930 81 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 AC009541.1-201ENST00000438279 2662 ntBASIC1.2□□□□□ -2.22
CLDN11O75508 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLDN11O75508 RNU1-96P-201ENST00000364163 162 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 RNU6-996P-201ENST00000365438 107 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 RNU6-877P-201ENST00000383868 107 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 MTCYBP8-201ENST00000422855 651 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 USP9YP28-201ENST00000435142 589 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 snoU13.30-201ENST00000458951 104 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 RNU7-180P-201ENST00000459240 63 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 RNU6-1037P-201ENST00000459571 107 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 MTND4P7-201ENST00000523876 130 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 LRRC34P1-201ENST00000542742 915 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AC090115.3-201ENST00000553218 849 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDN11O75508 MIR5583-1-201ENST00000580941 59 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
CLDN11O75508 MIR302D-201ENST00000362275 68 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 RNU6-562P-201ENST00000362731 107 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 SNORD33-201ENST00000362761 85 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 Y_RNA.159-201ENST00000363674 87 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 RNU6-53P-201ENST00000365367 106 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 MIR300-201ENST00000401138 83 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC090960.1-201ENST00000421072 306 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 MTCO3P29-201ENST00000432119 779 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN11O75508 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN11O75508 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN11O75508 AC093852.1-201ENST00000503587 266 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC067942.3-201ENST00000512025 362 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC010493.1-201ENST00000513479 292 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 RNU6-1041P-201ENST00000516254 102 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 RNU6-856P-201ENST00000516959 98 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 RNA5SP437-201ENST00000517249 129 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN11O75508 AL160236.1-201ENST00000556317 195 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 uc_338.34-201ENST00000617467 174 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
CLDN11O75508 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
CLDN11O75508 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLDN11O75508 RNU6-545P-201ENST00000362681 104 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 SNORA63D-201ENST00000364359 132 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 SNORA18.2-201ENST00000383865 132 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 RNU5A-6P-201ENST00000384136 116 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.17□□□□□ -2.22
CLDN11O75508 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 AC069257.2-201ENST00000441819 155 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN11O75508 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.17□□□□□ -2.22
CLDN11O75508 HMGN2P9-201ENST00000476875 229 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 RNU6-612P-201ENST00000516909 102 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN11O75508 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN11O75508 AC145350.1-201ENST00000567426 208 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 SNORA59B-202ENST00000578183 701 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 CTHRC1P1-201ENST00000605383 469 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 MIR3976-201ENST00000606807 139 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
CLDN11O75508 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CLDN11O75508 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
CLDN11O75508 Y_RNA.4-201ENST00000362333 112 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 RNU6-227P-201ENST00000362865 103 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 MIR548B-201ENST00000385247 97 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 SNORD73A-201ENST00000386062 65 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 AL117342.1-201ENST00000404861 406 ntBASIC1.16□□□□□ -2.22
CLDN11O75508 RN7SKP142-201ENST00000411236 328 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms