Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MIR218-2-201ENST00000385006 110 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF40AO75400 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF40AO75400 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF40AO75400 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF40AO75400 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF40AO75400 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF40AO75400 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF40AO75400 AC009779.6-201ENST00000603972 165 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 SNORD11B-201ENST00000607707 90 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 AC107294.3-201ENST00000609211 526 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 AC019176.2-201ENST00000611579 315 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 AC135776.4-201ENST00000624300 1904 ntBASIC3.87□□□□□ -1.79
PRPF40AO75400 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF40AO75400 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF40AO75400 Y_RNA.415-201ENST00000384012 112 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 ELOCP21-201ENST00000412558 336 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF40AO75400 RPL23AP3-201ENST00000453844 468 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RPL7P49-201ENST00000471402 708 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RNU6-138P-201ENST00000515952 107 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RNU6-344P-201ENST00000516635 111 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RNU1-117P-201ENST00000517041 158 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF40AO75400 MIR3944-201ENST00000581277 108 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF40AO75400 AC022441.3-201ENST00000605737 136 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF40AO75400 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF40AO75400 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.86□□□□□ -1.79
PRPF40AO75400 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF40AO75400 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF40AO75400 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF40AO75400 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF40AO75400 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF40AO75400 MAPK10-322ENST00000641485 4530 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF40AO75400 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF40AO75400 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PRPF40AO75400 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF40AO75400 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF40AO75400 MIR29B2-201ENST00000385055 81 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 SNORA12-201ENST00000391162 147 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 RNA5SP475-201ENST00000410568 110 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 MTND5P15-201ENST00000434246 349 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC009237.7-201ENST00000447357 229 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC115115.1-201ENST00000449927 248 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC140059.1-201ENST00000489238 361 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF40AO75400 RNU2-44P-201ENST00000516795 194 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 SCARNA11.3-201ENST00000517276 130 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC245166.1-201ENST00000521012 253 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC055872.1-201ENST00000570978 278 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 AC004467.1-201ENST00000615678 330 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 MIR3674-201ENST00000636576 68 ntBASIC3.85□□□□□ -1.79
PRPF40AO75400 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF40AO75400 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF40AO75400 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF40AO75400 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PRPF40AO75400 SNORA63.1-201ENST00000362493 131 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 Y_RNA.269-201ENST00000364685 89 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 Y_RNA.383-201ENST00000383855 97 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF40AO75400 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF40AO75400 RPL31P41-201ENST00000477967 372 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 RNA5SP217-201ENST00000515959 91 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF40AO75400 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.84□□□□□ -1.79
PRPF40AO75400 DEFB131C-201ENST00000528817 165 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF40AO75400 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF40AO75400 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AL590240.4-201ENST00000616908 390 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AC091932.3-201ENST00000624223 323 ntBASIC3.84□□□□□ -1.79
PRPF40AO75400 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF40AO75400 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PRPF40AO75400 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRPF40AO75400 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF40AO75400 MIR410-201ENST00000362222 80 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 RNU6-1264P-201ENST00000383891 107 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 SNORD58.1-201ENST00000391313 66 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 RPL21P3-201ENST00000395517 478 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 CST9LP2-201ENST00000437612 320 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF40AO75400 MRPS10P1-201ENST00000448483 130 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 PRSS3P4-201ENST00000453323 162 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 AC146507.2-201ENST00000460608 476 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 RN7SL293P-201ENST00000481765 281 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 uc_338.1-201ENST00000612113 180 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF40AO75400 AC092593.1-201ENST00000515413 1815 ntBASIC3.83□□□□□ -1.8
PRPF40AO75400 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF40AO75400 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40AO75400 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40AO75400 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms