Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RNU5F-3P-201ENST00000363767 117 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 Z98749.2-208ENST00000381646 500 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RNU6-147P-201ENST00000383983 107 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 Y_RNA.498-201ENST00000384460 102 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RNU6-460P-201ENST00000391158 108 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 ELOCP21-201ENST00000412558 336 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RPL26P27-201ENST00000414397 437 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RPL37P4-201ENST00000448908 268 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM13O60858 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RN7SL132P-201ENST00000478131 296 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RNA5SP54-201ENST00000516951 92 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 RN7SL703P-201ENST00000578485 302 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 AC023043.3-201ENST00000593113 385 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 AC099778.2-201ENST00000610904 211 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TRIM13O60858 AC007256.1-201ENST00000392253 2765 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM13O60858 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TRIM13O60858 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM13O60858 MTND5P32-201ENST00000560711 1802 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM13O60858 RNA5SP51-201ENST00000364750 119 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 Y_RNA.329-201ENST00000365209 107 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 MIR518D-201ENST00000385014 87 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 MIR626-201ENST00000385032 94 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 SNORD37.2-201ENST00000391075 66 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM13O60858 GPM6BP3-201ENST00000442797 145 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 AP000705.1-201ENST00000454567 350 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM13O60858 RNU1-103P-201ENST00000516502 125 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 RNU6-1183P-201ENST00000517054 60 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 U7.2-201ENST00000607576 63 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 U2.21-201ENST00000637295 81 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM13O60858 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.38□□□□□ -1.87
TRIM13O60858 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM13O60858 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TRIM13O60858 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM13O60858 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM13O60858 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM13O60858 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM13O60858 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM13O60858 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM13O60858 Y_RNA.179-201ENST00000363844 90 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 RNU6-801P-201ENST00000364087 105 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 SNORA56-201ENST00000383966 129 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 RNU1-73P-201ENST00000383971 164 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 RNU6-1310P-201ENST00000384153 107 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 SNORA36A-201ENST00000384221 132 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 SNORA11B-201ENST00000408175 129 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC006461.1-201ENST00000412637 326 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 RPS26P42-201ENST00000413485 326 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM13O60858 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM13O60858 AC007969.2-201ENST00000441891 191 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 HMGB3P8-201ENST00000449709 577 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 snoU13.6-201ENST00000458785 104 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC016632.1-201ENST00000503994 196 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AP001328.1-201ENST00000528550 176 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC090049.2-201ENST00000550377 109 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 MIR5685-201ENST00000579080 79 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC013791.1-201ENST00000616619 62 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 ZYXP1-201ENST00000617638 118 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC134026.1-201ENST00000623249 2239 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM13O60858 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM13O60858 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
TRIM13O60858 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TRIM13O60858 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM13O60858 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM13O60858 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM13O60858 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 RNU6-778P-201ENST00000363269 103 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 RNU4-10P-201ENST00000364383 140 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 SNORA22-201ENST00000383907 134 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 SNORA8.3-201ENST00000384679 139 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 SNORA26.5-201ENST00000391215 123 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 RNA5SP89-201ENST00000410300 108 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM13O60858 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms