Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.61□□□□□ -2.15
RIPK2O43353 RNU7-66P-201ENST00000459469 62 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC087477.1-201ENST00000465747 340 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC010409.1-201ENST00000487382 476 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC145146.1-201ENST00000496370 254 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 MTCYBP18-201ENST00000501056 747 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AK3P2-201ENST00000507976 429 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 RPL39P5-202ENST00000512505 151 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 BNIP3P16-201ENST00000589779 534 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC107304.1-201ENST00000604229 296 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AL357078.3-201ENST00000607528 618 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.61□□□□□ -2.15
RIPK2O43353 AC064836.2-201ENST00000609491 462 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC027514.1-201ENST00000588561 1603 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
RIPK2O43353 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.61□□□□□ -2.15
RIPK2O43353 SNORD114-6-201ENST00000364393 72 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 RNU4-56P-201ENST00000364700 142 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 SNORD32A-201ENST00000364805 84 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 Y_RNA.295-201ENST00000364918 102 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 RNU6-332P-201ENST00000391193 108 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 EIF4E2P1-201ENST00000393781 255 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 RNU4-26P-201ENST00000410270 107 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AC123900.1-201ENST00000420390 96 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.6□□□□□ -2.15
RIPK2O43353 AL358453.1-201ENST00000422522 250 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AC092989.1-201ENST00000481235 277 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AC096745.1-201ENST00000509945 370 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.6□□□□□ -2.15
RIPK2O43353 AC087854.1-201ENST00000519706 414 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.6□□□□□ -2.15
RIPK2O43353 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
RIPK2O43353 VN1R107P-201ENST00000601784 209 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 AC090617.10-201ENST00000624308 134 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 SNORD98-201ENST00000636377 67 ntBASIC1.6□□□□□ -2.15
RIPK2O43353 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RIPK2O43353 RNU6-1141P-201ENST00000364520 107 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 Y_RNA.373-201ENST00000365600 103 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RIPK2O43353 Y_RNA.453-201ENST00000384223 109 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 RNU6-43P-201ENST00000384302 107 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 Y_RNA.619-201ENST00000410951 90 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 RNU6-1148P-201ENST00000410992 104 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 FCF1P9-201ENST00000412546 282 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 EIF1P1-201ENST00000421436 341 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.59□□□□□ -2.15
RIPK2O43353 MTCO2P3-201ENST00000442543 421 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.15
RIPK2O43353 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 AC130509.1-201ENST00000464158 433 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 AC104576.1-201ENST00000524225 88 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.59□□□□□ -2.15
RIPK2O43353 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.59□□□□□ -2.15
RIPK2O43353 MIR3945-201ENST00000581853 98 ntBASIC1.59□□□□□ -2.15
RIPK2O43353 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
RIPK2O43353 MTND5P9-201ENST00000503854 1755 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-1252P-201ENST00000363054 104 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-254P-201ENST00000363377 107 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-1329P-201ENST00000365664 107 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-877P-201ENST00000383868 107 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 MIR1277-201ENST00000408536 78 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.58□□□□□ -2.16
RIPK2O43353 AL359672.1-201ENST00000442302 409 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.58□□□□□ -2.16
RIPK2O43353 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.58□□□□□ -2.16
RIPK2O43353 AC008628.2-201ENST00000502605 298 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AC021146.2-201ENST00000504736 556 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 HMGN1P13-201ENST00000505795 138 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.58□□□□□ -2.16
RIPK2O43353 AC091874.1-201ENST00000511402 339 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AC092436.3-201ENST00000511788 257 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AL356157.2-201ENST00000605122 111 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 AC007014.2-201ENST00000615581 479 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 MIR3662-201ENST00000637030 95 ntBASIC1.58□□□□□ -2.16
RIPK2O43353 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RIPK2O43353 RNU6-112P-201ENST00000363599 104 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 MTCYBP2-201ENST00000407745 171 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AL513185.2-201ENST00000425543 193 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 MTCO3P46-201ENST00000425787 232 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 RPL23AP95-201ENST00000426806 265 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 NDUFA5P4-201ENST00000436704 385 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.57□□□□□ -2.16
RIPK2O43353 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 RNU6-1332P-201ENST00000516666 104 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.57□□□□□ -2.16
RIPK2O43353 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 MIR4648-201ENST00000580107 72 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AP003465.2-201ENST00000602571 373 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AP001836.1-201ENST00000604675 523 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AC122108.2-201ENST00000611946 526 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 AC084782.3-201ENST00000612282 578 ntBASIC1.57□□□□□ -2.16
RIPK2O43353 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
RIPK2O43353 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms