Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 HMGN2P34-201ENST00000437647 269 ntBASIC0.76□□□□□ -2.29
CRXO43186 AL603825.1-201ENST00000438481 80 ntBASIC0.76□□□□□ -2.29
CRXO43186 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.76□□□□□ -2.29
CRXO43186 AL163540.1-201ENST00000485382 386 ntBASIC0.76□□□□□ -2.29
CRXO43186 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.76□□□□□ -2.29
CRXO43186 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.76□□□□□ -2.29
CRXO43186 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
CRXO43186 AC080078.3-201ENST00000605407 463 ntBASIC0.76□□□□□ -2.29
CRXO43186 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.76□□□□□ -2.29
CRXO43186 AL136221.1-201ENST00000621449 509 ntBASIC0.76□□□□□ -2.29
CRXO43186 AC006001.4-201ENST00000622243 395 ntBASIC0.76□□□□□ -2.29
CRXO43186 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.76□□□□□ -2.29
CRXO43186 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CRXO43186 snoU2-30.2-201ENST00000362805 70 ntBASIC0.75□□□□□ -2.29
CRXO43186 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
CRXO43186 RNU6-534P-201ENST00000364877 106 ntBASIC0.75□□□□□ -2.29
CRXO43186 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CRXO43186 SNORA16.2-201ENST00000390991 127 ntBASIC0.75□□□□□ -2.29
CRXO43186 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.75□□□□□ -2.29
CRXO43186 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.75□□□□□ -2.29
CRXO43186 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.75□□□□□ -2.29
CRXO43186 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.75□□□□□ -2.29
CRXO43186 AC087343.1-201ENST00000477341 475 ntBASIC0.75□□□□□ -2.29
CRXO43186 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.75□□□□□ -2.29
CRXO43186 RNU2-34P-201ENST00000516534 121 ntBASIC0.75□□□□□ -2.29
CRXO43186 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
CRXO43186 AL359821.1-201ENST00000605519 182 ntBASIC0.75□□□□□ -2.29
CRXO43186 AC104458.1-201ENST00000608243 463 ntBASIC0.75□□□□□ -2.29
CRXO43186 AC021506.2-201ENST00000612354 169 ntBASIC0.75□□□□□ -2.29
CRXO43186 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CRXO43186 RNU6-266P-201ENST00000364225 107 ntBASIC0.74□□□□□ -2.29
CRXO43186 RNU6-392P-201ENST00000364926 101 ntBASIC0.74□□□□□ -2.29
CRXO43186 RNU6-910P-201ENST00000390844 107 ntBASIC0.74□□□□□ -2.29
CRXO43186 RNA5SP323-201ENST00000391094 133 ntBASIC0.74□□□□□ -2.29
CRXO43186 RNA5SP467-201ENST00000391274 118 ntBASIC0.74□□□□□ -2.29
CRXO43186 RPS3AP3-201ENST00000411933 242 ntBASIC0.74□□□□□ -2.29
CRXO43186 AC092473.1-201ENST00000441098 221 ntBASIC0.74□□□□□ -2.29
CRXO43186 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
CRXO43186 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.74□□□□□ -2.29
CRXO43186 FABP5P5-201ENST00000515537 406 ntBASIC0.74□□□□□ -2.29
CRXO43186 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.74□□□□□ -2.29
CRXO43186 AGGF1P4-201ENST00000568249 801 ntBASIC0.74□□□□□ -2.29
CRXO43186 MIR4498-201ENST00000577599 66 ntBASIC0.74□□□□□ -2.29
CRXO43186 Z99497.2-201ENST00000603634 310 ntBASIC0.74□□□□□ -2.29
CRXO43186 AC016727.2-201ENST00000603988 621 ntBASIC0.74□□□□□ -2.29
CRXO43186 AC009509.4-201ENST00000619202 509 ntBASIC0.74□□□□□ -2.29
CRXO43186 AL133216.2-202ENST00000634512 349 ntBASIC0.74□□□□□ -2.29
CRXO43186 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
CRXO43186 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
CRXO43186 RNU6-1214P-201ENST00000363650 109 ntBASIC0.73□□□□□ -2.29
CRXO43186 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
CRXO43186 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
CRXO43186 MIR1253-201ENST00000408273 105 ntBASIC0.73□□□□□ -2.29
CRXO43186 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.73□□□□□ -2.29
CRXO43186 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC013410.2-201ENST00000422627 201 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC011233.1-201ENST00000422812 283 ntBASIC0.73□□□□□ -2.29
CRXO43186 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.73□□□□□ -2.29
CRXO43186 AL593851.1-201ENST00000426171 157 ntBASIC0.73□□□□□ -2.29
CRXO43186 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.73□□□□□ -2.29
CRXO43186 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.73□□□□□ -2.29
CRXO43186 AC004386.2-201ENST00000441858 148 ntBASIC0.73□□□□□ -2.29
CRXO43186 SCARNA18-201ENST00000459004 134 ntBASIC0.73□□□□□ -2.29
CRXO43186 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
CRXO43186 RPL39P38-201ENST00000467018 153 ntBASIC0.73□□□□□ -2.29
CRXO43186 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.73□□□□□ -2.29
CRXO43186 MTATP6P9-201ENST00000515039 680 ntBASIC0.73□□□□□ -2.29
CRXO43186 SNORA31.2-201ENST00000516019 134 ntBASIC0.73□□□□□ -2.29
CRXO43186 RNU6-1069P-201ENST00000516612 133 ntBASIC0.73□□□□□ -2.29
CRXO43186 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.73□□□□□ -2.29
CRXO43186 MIR5006-201ENST00000583027 110 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
CRXO43186 AL022161.1-201ENST00000604390 213 ntBASIC0.73□□□□□ -2.29
CRXO43186 MIR98-201ENST00000606724 119 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC005562.2-201ENST00000618264 111 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC022306.3-201ENST00000619930 550 ntBASIC0.73□□□□□ -2.29
CRXO43186 AC091895.1-201ENST00000624494 256 ntBASIC0.73□□□□□ -2.29
CRXO43186 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.73□□□□□ -2.29
CRXO43186 AC009541.1-201ENST00000438279 2662 ntBASIC0.72□□□□□ -2.29
CRXO43186 RNU6-975P-201ENST00000384296 105 ntBASIC0.72□□□□□ -2.29
CRXO43186 RNU6-1127P-201ENST00000384580 107 ntBASIC0.72□□□□□ -2.29
CRXO43186 RNU6-925P-201ENST00000384629 104 ntBASIC0.72□□□□□ -2.29
CRXO43186 MIR549A-201ENST00000385268 96 ntBASIC0.72□□□□□ -2.29
CRXO43186 AP000275.1-201ENST00000411943 390 ntBASIC0.72□□□□□ -2.29
CRXO43186 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.72□□□□□ -2.29
CRXO43186 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
CRXO43186 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.72□□□□□ -2.29
CRXO43186 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.72□□□□□ -2.29
CRXO43186 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.72□□□□□ -2.29
CRXO43186 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
CRXO43186 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.72□□□□□ -2.29
CRXO43186 AC048334.1-201ENST00000477975 159 ntBASIC0.72□□□□□ -2.29
CRXO43186 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
CRXO43186 RNU6-1146P-201ENST00000516282 102 ntBASIC0.72□□□□□ -2.29
CRXO43186 SNORD27.1-201ENST00000516319 72 ntBASIC0.72□□□□□ -2.29
CRXO43186 RNU6-323P-201ENST00000521915 107 ntBASIC0.72□□□□□ -2.29
CRXO43186 MIR4703-201ENST00000577728 79 ntBASIC0.72□□□□□ -2.29
CRXO43186 MIR3682-201ENST00000581338 84 ntBASIC0.72□□□□□ -2.29
CRXO43186 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.72□□□□□ -2.29
CRXO43186 RNU6-85P-201ENST00000605989 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms