Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.17□□□□□ -2.06
TO15178 RNU6-667P-201ENST00000517186 102 ntBASIC2.17□□□□□ -2.06
TO15178 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
TO15178 AC034114.1-201ENST00000520293 285 ntBASIC2.17□□□□□ -2.06
TO15178 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
TO15178 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.17□□□□□ -2.06
TO15178 AL158827.2-201ENST00000602494 330 ntBASIC2.17□□□□□ -2.06
TO15178 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.17□□□□□ -2.06
TO15178 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
TO15178 AL132765.2-201ENST00000610812 351 ntBASIC2.17□□□□□ -2.06
TO15178 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.17□□□□□ -2.06
TO15178 AC098657.3-201ENST00000620434 263 ntBASIC2.17□□□□□ -2.06
TO15178 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.17□□□□□ -2.06
TO15178 AL691447.3-201ENST00000635020 330 ntBASIC2.17□□□□□ -2.06
TO15178 KPNA2P1-201ENST00000458289 1591 ntBASIC2.17□□□□□ -2.06
TO15178 AC005336.3-201ENST00000623833 2679 ntBASIC2.17□□□□□ -2.06
TO15178 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TO15178 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TO15178 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
TO15178 Y_RNA.70-201ENST00000362886 110 ntBASIC2.16□□□□□ -2.06
TO15178 RNU6-595P-201ENST00000363944 107 ntBASIC2.16□□□□□ -2.06
TO15178 SNORD115-32-201ENST00000364079 82 ntBASIC2.16□□□□□ -2.06
TO15178 EDDM3CP-201ENST00000415977 425 ntBASIC2.16□□□□□ -2.06
TO15178 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.16□□□□□ -2.06
TO15178 snoU13.30-201ENST00000458951 104 ntBASIC2.16□□□□□ -2.06
TO15178 RPL7P42-201ENST00000481005 679 ntBASIC2.16□□□□□ -2.06
TO15178 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.16□□□□□ -2.06
TO15178 RNU6-559P-201ENST00000516151 98 ntBASIC2.16□□□□□ -2.06
TO15178 RNU6-965P-201ENST00000516721 96 ntBASIC2.16□□□□□ -2.06
TO15178 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.16□□□□□ -2.06
TO15178 AL590705.4-201ENST00000532209 134 ntBASIC2.16□□□□□ -2.06
TO15178 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
TO15178 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.16□□□□□ -2.06
TO15178 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.16□□□□□ -2.06
TO15178 RMST_6.1-201ENST00000611980 203 ntBASIC2.16□□□□□ -2.06
TO15178 AL132822.1-201ENST00000617063 513 ntBASIC2.16□□□□□ -2.06
TO15178 AL359757.2-201ENST00000624309 274 ntBASIC2.16□□□□□ -2.06
TO15178 MIR1302-1-201ENST00000637932 143 ntBASIC2.16□□□□□ -2.06
TO15178 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TO15178 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TO15178 RNU4-82P-201ENST00000362443 140 ntBASIC2.15□□□□□ -2.07
TO15178 Y_RNA.356-201ENST00000365475 113 ntBASIC2.15□□□□□ -2.07
TO15178 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
TO15178 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
TO15178 RNU7-175P-201ENST00000515915 61 ntBASIC2.15□□□□□ -2.07
TO15178 SNORA4.4-201ENST00000515921 135 ntBASIC2.15□□□□□ -2.07
TO15178 RNU6-277P-201ENST00000516272 106 ntBASIC2.15□□□□□ -2.07
TO15178 RNU6-1198P-201ENST00000516904 67 ntBASIC2.15□□□□□ -2.07
TO15178 RNU2-19P-201ENST00000517288 84 ntBASIC2.15□□□□□ -2.07
TO15178 CBX3P8-201ENST00000532412 525 ntBASIC2.15□□□□□ -2.07
TO15178 AC090517.1-201ENST00000569307 266 ntBASIC2.15□□□□□ -2.07
TO15178 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.15□□□□□ -2.07
TO15178 AC010928.2-201ENST00000588017 287 ntBASIC2.15□□□□□ -2.07
TO15178 Y_RNA.804-201ENST00000615262 101 ntBASIC2.15□□□□□ -2.07
TO15178 AL669831.3-213ENST00000636676 183 ntBASIC2.15□□□□□ -2.07
TO15178 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.15□□□□□ -2.07
TO15178 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TO15178 MIR449A-201ENST00000362113 91 ntBASIC2.14□□□□□ -2.07
TO15178 Y_RNA.48-201ENST00000362710 103 ntBASIC2.14□□□□□ -2.07
TO15178 Y_RNA.404-201ENST00000383978 102 ntBASIC2.14□□□□□ -2.07
TO15178 RNU6-1297P-201ENST00000384415 104 ntBASIC2.14□□□□□ -2.07
TO15178 MIR32-201ENST00000384965 70 ntBASIC2.14□□□□□ -2.07
TO15178 MIR153-2-201ENST00000385225 87 ntBASIC2.14□□□□□ -2.07
TO15178 MT-TD-201ENST00000387419 68 ntBASIC2.14□□□□□ -2.07
TO15178 MIR320B2-201ENST00000408479 138 ntBASIC2.14□□□□□ -2.07
TO15178 Z82188.1-201ENST00000436709 154 ntBASIC2.14□□□□□ -2.07
TO15178 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.14□□□□□ -2.07
TO15178 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.14□□□□□ -2.07
TO15178 RPL30P10-201ENST00000488148 337 ntBASIC2.14□□□□□ -2.07
TO15178 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.14□□□□□ -2.07
TO15178 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.14□□□□□ -2.07
TO15178 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.14□□□□□ -2.07
TO15178 AC026470.2-201ENST00000561492 181 ntBASIC2.14□□□□□ -2.07
TO15178 AC026271.5-201ENST00000577873 130 ntBASIC2.14□□□□□ -2.07
TO15178 MIR4513-201ENST00000581077 86 ntBASIC2.14□□□□□ -2.07
TO15178 SNRPGP17-201ENST00000603780 214 ntBASIC2.14□□□□□ -2.07
TO15178 LARP7P1-201ENST00000605576 316 ntBASIC2.14□□□□□ -2.07
TO15178 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
TO15178 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TO15178 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.13□□□□□ -2.07
TO15178 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
TO15178 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
TO15178 RNU6-1188P-201ENST00000363795 107 ntBASIC2.13□□□□□ -2.07
TO15178 RNU6-234P-201ENST00000365229 104 ntBASIC2.13□□□□□ -2.07
TO15178 XGY1-201ENST00000381172 446 ntBASIC2.13□□□□□ -2.07
TO15178 Y_RNA.529-201ENST00000384586 119 ntBASIC2.13□□□□□ -2.07
TO15178 AL357139.1-201ENST00000407792 426 ntBASIC2.13□□□□□ -2.07
TO15178 RNU2-41P-201ENST00000410991 178 ntBASIC2.13□□□□□ -2.07
TO15178 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TO15178 RPL23AP50-201ENST00000434149 455 ntBASIC2.13□□□□□ -2.07
TO15178 AC018634.1-201ENST00000437554 401 ntBASIC2.13□□□□□ -2.07
TO15178 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.13□□□□□ -2.07
TO15178 AC007215.1-201ENST00000464893 276 ntBASIC2.13□□□□□ -2.07
TO15178 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.13□□□□□ -2.07
TO15178 MIR449C-201ENST00000516047 92 ntBASIC2.13□□□□□ -2.07
TO15178 RNA5SP384-201ENST00000516615 116 ntBASIC2.13□□□□□ -2.07
TO15178 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
TO15178 RNA5SP54-201ENST00000516951 92 ntBASIC2.13□□□□□ -2.07
TO15178 APOOP3-201ENST00000536787 586 ntBASIC2.13□□□□□ -2.07
TO15178 FRG2DP-202ENST00000566967 323 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms