Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC110760.3-202ENST00000515177 371 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 RNU6-856P-201ENST00000516959 98 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 MIR4778-201ENST00000577635 80 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 MIR4432-201ENST00000581823 84 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 MIR4493-201ENST00000584016 73 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 MIR760-201ENST00000390220 80 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 MIR1185-1-201ENST00000408598 86 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 RNU6-77P-201ENST00000410554 91 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC007395.1-201ENST00000451333 677 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC013828.2-201ENST00000532487 235 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 MIR4263-201ENST00000584745 83 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 MIR3192-201ENST00000584920 77 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC093875.1-201ENST00000623688 504 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AL356596.1-201ENST00000624230 379 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 AC098679.4-201ENST00000624241 654 ntBASIC-1.22□□□□□ -2.6
LINC01549A6NIU2 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.540-201ENST00000384638 111 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AL606517.1-201ENST00000446914 387 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AC009902.1-201ENST00000519351 183 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 MIR3124-201ENST00000582636 67 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AC246785.4-201ENST00000605374 287 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AC019226.1-201ENST00000625666 515 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 AL162726.3-218ENST00000636401 95 ntBASIC-1.23□□□□□ -2.61
LINC01549A6NIU2 RNU6-386P-201ENST00000362650 107 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AC083799.1-201ENST00000366451 910 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 SNORA12.1-201ENST00000390873 148 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 DPRXP1-201ENST00000426312 460 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AL356583.2-201ENST00000426536 280 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AC107401.1-201ENST00000503426 685 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AC074198.2-201ENST00000508153 258 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AC022616.3-201ENST00000523940 148 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 AC006504.8-201ENST00000621046 635 ntBASIC-1.24□□□□□ -2.61
LINC01549A6NIU2 RNU6-369P-201ENST00000362515 102 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 SNORA25.7-201ENST00000364375 127 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 SNORD49B-201ENST00000365172 72 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 MIR224-201ENST00000384889 81 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 RNU6-754P-201ENST00000391166 107 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 AL136310.1-201ENST00000404926 654 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 RNU6-735P-201ENST00000410612 107 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 RNU6-180P-201ENST00000516697 61 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 AL355073.2-201ENST00000612106 557 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 AC099654.9-201ENST00000637055 678 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 MTND4P21-201ENST00000453886 1357 ntBASIC-1.25□□□□□ -2.61
LINC01549A6NIU2 SNORA33-201ENST00000363664 130 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 MIR421-201ENST00000365696 85 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 MIR329-1-201ENST00000385028 80 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 MT-TQ-201ENST00000387372 72 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 AL590084.2-201ENST00000401481 382 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 AC109445.1-201ENST00000512356 383 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 RNU2-46P-201ENST00000517038 113 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 MRPS36P4-201ENST00000534436 298 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 AC009712.1-201ENST00000564938 316 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 RPL21P136-201ENST00000605378 396 ntBASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.26□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 RNU6-932P-201ENST00000391108 106 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 SNORA12-201ENST00000391162 147 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 RNU4-30P-201ENST00000410245 143 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 AL606517.2-201ENST00000442855 241 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 MTATP6P30-201ENST00000443540 664 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 AC069271.1-201ENST00000445577 156 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 USP9YP25-201ENST00000457708 443 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 RPL17P19-201ENST00000489069 552 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 AC024995.1-201ENST00000523014 93 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 LRRC6P1-201ENST00000532188 885 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 AC131159.1-201ENST00000621854 213 ntBASIC-1.27□□□□□ -2.61
LINC01549A6NIU2 MTND5P32-201ENST00000560711 1802 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 SNORD31B-201ENST00000364977 69 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 MIR604-201ENST00000384880 94 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 MIR1912-201ENST00000410389 80 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 AL050341.1-201ENST00000447743 313 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 MIR499B-201ENST00000636498 73 ntBASIC-1.28□□□□□ -2.61
LINC01549A6NIU2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms