Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 MAPK10-362ENST00000641864 4484 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 OR56A5-201ENST00000340110 738 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNU6-655P-201ENST00000362858 107 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNU6-281P-201ENST00000384212 103 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNU6-318P-201ENST00000384283 103 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNU6-851P-201ENST00000384565 107 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 MIR512-1-201ENST00000384913 84 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 RNA5SP356-201ENST00000515972 94 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 SNORA31.6-201ENST00000516241 130 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AC093023.1-201ENST00000547375 507 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 UBL5P4-201ENST00000562584 236 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 MIR5695-201ENST00000579717 85 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AC125232.2-201ENST00000592457 143 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 AC240442.1-201ENST00000616055 283 ntBASIC3.34□□□□□ -1.87
PTPDC1A2A3K4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTPDC1A2A3K4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.34□□□□□ -1.88
PTPDC1A2A3K4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.34□□□□□ -1.88
PTPDC1A2A3K4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.64-201ENST00000362845 102 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 RNU6-806P-201ENST00000365147 105 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 CD24P4-201ENST00000382840 243 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC007215.1-201ENST00000464893 276 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AL121594.1-201ENST00000475906 575 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 RN7SKP49-201ENST00000516675 260 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 MIR4659A-201ENST00000580269 81 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC004832.5-201ENST00000608677 401 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPDC1A2A3K4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 RNU6-280P-201ENST00000364145 104 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 MIR208B-201ENST00000401172 77 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 CBX3P9-201ENST00000402326 552 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 Z98742.2-201ENST00000431564 187 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 LINC01399-202ENST00000458450 244 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 MRPS36P2-201ENST00000512569 299 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 AL356575.1-201ENST00000603008 283 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 AC006023.1-201ENST00000603944 259 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 AC002064.3-201ENST00000623448 346 ntBASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPDC1A2A3K4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 MT-TG-201ENST00000387429 68 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 MRPL35P1-201ENST00000404272 572 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 MIR1302-6-201ENST00000408466 90 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 RPS3P1-201ENST00000456781 192 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC003982.1-202ENST00000469928 248 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC025465.3-201ENST00000510570 311 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 RAC1P5-201ENST00000512182 576 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 RNU2-53P-201ENST00000516257 147 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AP003733.2-201ENST00000529409 171 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 AC110588.1-201ENST00000559699 137 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 MIR4765-201ENST00000585007 77 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 U6.104-201ENST00000637979 90 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 BX322639.1-202ENST00000423987 2213 ntBASIC3.31□□□□□ -1.88
PTPDC1A2A3K4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms