Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC090574.1-201ENST00000623186 233 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC092593.1-201ENST00000515413 1815 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU1-76P-201ENST00000362903 159 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-280P-201ENST00000364145 104 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 SNORA18.2-201ENST00000383865 132 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR625-201ENST00000385047 85 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AF228730.4-201ENST00000421457 183 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 USP9YP16-201ENST00000430287 407 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC099799.1-201ENST00000439809 192 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 USP9YP23-201ENST00000455085 407 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC107032.1-201ENST00000485945 480 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 RPS23P5-201ENST00000495419 428 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC008549.1-201ENST00000512900 643 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC027288.2-201ENST00000553028 243 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 SNRPGP17-201ENST00000603780 214 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC080078.3-201ENST00000605407 463 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AL132822.1-201ENST00000617063 513 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR6852-201ENST00000621699 66 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 AC073544.1-201ENST00000600110 1595 ntBASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL4A3BPQ9Y5P4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-99P-201ENST00000364721 107 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 Y_RNA.364-201ENST00000365532 101 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 AC091144.1-201ENST00000519573 138 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 AC079600.2-201ENST00000550076 130 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 ZNF204P-201ENST00000416749 2397 ntBASIC3.11□□□□□ -1.91
COL4A3BPQ9Y5P4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR26A1-201ENST00000362205 77 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-1026P-201ENST00000384465 108 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU1-148P-201ENST00000384472 162 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 UBE2V1P7-201ENST00000446395 340 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 SNORA4.4-201ENST00000515921 135 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR449C-201ENST00000516047 92 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR5006-201ENST00000583027 110 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 ZNF861P-201ENST00000588126 639 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR1248-201ENST00000629190 106 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
COL4A3BPQ9Y5P4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 Y_RNA.535-201ENST00000384612 99 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 SNORD88.1-201ENST00000408684 91 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU2-48P-201ENST00000410694 191 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RPS20P15-201ENST00000412792 311 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 SRIP3-201ENST00000413200 219 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AL139281.1-201ENST00000422120 335 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC245102.2-201ENST00000448956 180 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 ANXA2P1-201ENST00000505539 926 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 HMGN1P13-201ENST00000505795 138 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 SNORA9.3-201ENST00000516383 129 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU2-44P-201ENST00000516795 194 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR4319-201ENST00000577285 85 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR3605-201ENST00000583214 100 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 AC107871.2-201ENST00000612894 502 ntBASIC3.09□□□□□ -1.91
COL4A3BPQ9Y5P4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.11-201ENST00000362375 109 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-743P-201ENST00000364151 106 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU1-139P-201ENST00000391307 165 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms