Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AL358176.2-201ENST00000425769 204 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 U8.22-201ENST00000459141 133 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 SCARNA3-201ENST00000517097 143 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 RPL30P11-203ENST00000598995 310 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 AL356575.1-201ENST00000603008 283 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-222P-201ENST00000362438 107 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 RNY3P4-201ENST00000384428 101 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-851P-201ENST00000384565 107 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 MIR208B-201ENST00000401172 77 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 MIR1252-201ENST00000408861 65 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 RPL23AP58-201ENST00000440453 469 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC096638.1-201ENST00000444678 216 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 MTCO3P8-201ENST00000453691 755 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 RPS29P30-201ENST00000600975 111 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AL078596.1-201ENST00000624856 447 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
PCDHA3Q9Y5H8 BX322639.1-202ENST00000423987 2213 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 RNU4-50P-201ENST00000364361 141 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-378P-201ENST00000384324 107 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 MIR487A-201ENST00000385009 80 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 MIR10B-201ENST00000385011 110 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 SNORA48.5-201ENST00000391143 135 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-1093P-201ENST00000391194 107 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 UBA52P6-201ENST00000399822 382 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 Z92545.1-201ENST00000411782 234 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 RPL30P4-201ENST00000429309 333 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 U8.20-201ENST00000459445 131 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AC003982.1-202ENST00000469928 248 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-1046P-201ENST00000516538 107 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL117187.1-201ENST00000555482 181 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL355297.3-201ENST00000604082 446 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AL021879.1-201ENST00000611756 288 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHA3Q9Y5H8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PCDHA3Q9Y5H8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.133-201ENST00000363428 110 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.153-201ENST00000363615 91 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 U3.9-201ENST00000363823 204 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-280P-201ENST00000364145 104 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-281P-201ENST00000384212 103 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 HMGB3P2-201ENST00000411913 584 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 WARS2P1-201ENST00000429678 537 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC080013.2-201ENST00000460866 323 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC145146.1-201ENST00000496370 254 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 SNORA9.3-201ENST00000516383 129 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.715-201ENST00000517082 110 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 MIR3605-201ENST00000583214 100 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC023043.3-201ENST00000593113 385 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 AC005000.2-201ENST00000605468 310 ntBASIC2.96□□□□□ -1.94
PCDHA3Q9Y5H8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 snoU2_19.1-201ENST00000362361 80 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-1301P-201ENST00000362724 104 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RNU1-72P-201ENST00000362976 153 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-450P-201ENST00000364654 107 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-245P-201ENST00000384020 107 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 MIR29B2-201ENST00000385055 81 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AL356057.3-201ENST00000402607 340 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 MIR548F4-201ENST00000408515 105 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms