Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC092268.1-201ENST00000342691 405 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 SNORA25.6-201ENST00000364121 118 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNU6-1286P-201ENST00000383871 107 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNU6-1297P-201ENST00000384415 104 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 EIF4EP2-201ENST00000422816 654 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC022447.4-201ENST00000504053 364 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.31□□□□□ -2.04
YIPF1Q9Y548 MIR5690-201ENST00000583739 73 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AL034555.1-201ENST00000604816 211 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 AC233981.2-201ENST00000611524 1614 ntBASIC2.31□□□□□ -2.04
YIPF1Q9Y548 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
YIPF1Q9Y548 RNU4-15P-201ENST00000362613 141 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 RNU4-79P-201ENST00000362764 141 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 SNORD116-29-201ENST00000384516 83 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 RNU6-310P-201ENST00000384655 107 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 SNORA26.3-201ENST00000391119 136 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.646-201ENST00000410980 101 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 RPL30P15-201ENST00000457129 321 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 RPL23AP75-201ENST00000491601 451 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AC021146.2-201ENST00000504736 556 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 CBX3P8-201ENST00000532412 525 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AC021231.3-201ENST00000558497 370 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 MIR5571-201ENST00000577998 113 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 MIR5696-201ENST00000578474 85 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 MIR3136-201ENST00000583498 78 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 Z98751.3-201ENST00000604447 521 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AL670379.2-201ENST00000604983 252 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AC084781.2-201ENST00000615568 161 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 AC010297.1-201ENST00000623948 149 ntBASIC2.3□□□□□ -2.04
YIPF1Q9Y548 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
YIPF1Q9Y548 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AC092881.1-201ENST00000638218 2733 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 RNU5B-2P-201ENST00000363036 113 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.259-201ENST00000364619 101 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 RNA5SP494-201ENST00000410653 129 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 MTCO3P10-201ENST00000455912 772 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AF186996.7-201ENST00000492781 209 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 SNORA31.15-201ENST00000516771 132 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.718-201ENST00000517110 102 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 FO624990.1-201ENST00000636373 85 ntBASIC2.29□□□□□ -2.04
YIPF1Q9Y548 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
YIPF1Q9Y548 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.61-201ENST00000362835 102 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 RNA5SP125-201ENST00000364843 120 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 Y_RNA.509-201ENST00000384506 99 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 MTCYBP4-201ENST00000401524 249 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AC012306.1-201ENST00000423267 114 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 USMG5P1-201ENST00000425964 177 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 Z82188.1-201ENST00000436709 154 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 SNORD19B-201ENST00000459623 84 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AC090096.1-201ENST00000489168 390 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AC097473.1-201ENST00000508142 408 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 RNU6-120P-201ENST00000516077 103 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 SCARNA16.2-201ENST00000516520 172 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 RNU6-586P-201ENST00000517265 104 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 RNU1-104P-201ENST00000517280 175 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 HSPE1P18-201ENST00000517602 280 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 MIR4446-201ENST00000578505 67 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 MIR3923-201ENST00000579521 83 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AL138963.2-201ENST00000605137 226 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.28□□□□□ -2.04
YIPF1Q9Y548 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
YIPF1Q9Y548 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms