Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RPL31P3-201ENST00000458430 332 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RNU7-138P-201ENST00000459479 64 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC010531.2-201ENST00000465012 153 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RPL39P5-202ENST00000512505 151 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RNU5F-4P-201ENST00000516581 114 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 SUMO2P18-201ENST00000518873 252 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 RAB11AP2-201ENST00000545905 639 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC015720.1-201ENST00000565251 277 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC090517.1-201ENST00000569307 266 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 MIR4424-201ENST00000585257 86 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AC121247.2-201ENST00000604776 136 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 HULC.1-201ENST00000612720 240 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 AL158063.1-201ENST00000615349 536 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 uc_338.34-201ENST00000617467 174 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
LRRC42Q9Y546 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
LRRC42Q9Y546 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 RNU5A-6P-201ENST00000384136 116 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 RNU6-1103P-201ENST00000384150 107 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 RNA5SP219-201ENST00000390940 113 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 RNU6-1158P-201ENST00000391167 107 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AL353193.1-201ENST00000421444 268 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC012306.1-201ENST00000423267 114 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC073464.1-201ENST00000429823 534 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 DEFB131C-201ENST00000528817 165 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 VN1R80P-201ENST00000597126 338 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC064807.4-201ENST00000607201 407 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AL136221.1-201ENST00000621449 509 ntBASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.13□□□□□ -2.23
LRRC42Q9Y546 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRC42Q9Y546 SNORD33-201ENST00000362761 85 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AC245047.4-201ENST00000433189 144 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 UBE2V1P8-201ENST00000437166 265 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.12□□□□□ -2.23
LRRC42Q9Y546 MTCO2P18-201ENST00000457151 658 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 RPL9P9-202ENST00000466501 579 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 MTND4P7-201ENST00000523876 130 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AP000889.1-201ENST00000530968 660 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 SNORA77B-201ENST00000578179 125 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AC004223.2-201ENST00000590309 544 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 RPL17P51-201ENST00000605218 238 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 CTHRC1P1-201ENST00000605383 469 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 AC083806.3-201ENST00000614016 455 ntBASIC1.12□□□□□ -2.23
LRRC42Q9Y546 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 Y_RNA.381-201ENST00000365666 102 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 MIR1289-2-201ENST00000408360 111 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AC007395.1-201ENST00000451333 677 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 ATP5J2P3-201ENST00000451550 258 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 SNORD13-201ENST00000459299 104 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 RPS29P27-201ENST00000463711 170 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 BET1P1-201ENST00000482276 359 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AL163973.1-201ENST00000484753 577 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 SNORA14.1-201ENST00000516113 141 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 SNORD60.2-201ENST00000516883 86 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 RNA5SP437-201ENST00000517249 129 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 SNORA59B-202ENST00000578183 701 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AC069114.2-201ENST00000604699 304 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AL354950.2-201ENST00000617939 290 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AL159152.1-201ENST00000635019 2587 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 AC009541.1-201ENST00000438279 2662 ntBASIC1.11□□□□□ -2.23
LRRC42Q9Y546 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LRRC42Q9Y546 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AC245060.5-201ENST00000610778 3293 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RNU6-414P-201ENST00000363705 104 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RNU6-1026P-201ENST00000384465 108 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AL606923.1-201ENST00000406616 190 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 C8orf59P1-201ENST00000429930 303 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 USP9YP28-201ENST00000435142 589 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 snoU13.6-201ENST00000458785 104 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RNU6-956P-201ENST00000458868 103 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RPS26P55-201ENST00000471178 356 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms