Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 AC091304.9-201ENST00000612091 226 ntBASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 AC136475.10-201ENST00000620253 385 ntBASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 MIR3974-201ENST00000637126 96 ntBASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 MTND5P17-201ENST00000418405 1603 ntBASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHTOPQ9Y3Y2 FGF7P2-201ENST00000332473 296 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD32A-201ENST00000364805 84 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 RNY3P10-201ENST00000384764 102 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 U8.13-201ENST00000390842 128 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AL117342.1-201ENST00000404861 406 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 RPS3AP3-201ENST00000411933 242 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 BTF3P4-201ENST00000418852 495 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC090960.1-201ENST00000421072 306 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 USP9YP14-201ENST00000430663 563 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 MTATP6P16-201ENST00000434543 526 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AL033528.1-201ENST00000453780 140 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SNRPGP9-201ENST00000456025 225 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 snoU13.15-201ENST00000459407 104 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 snoU13.26-201ENST00000459452 105 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD42A-201ENST00000459584 64 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC007547.1-201ENST00000462177 490 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 Y_RNA.688-201ENST00000516565 95 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 RNU2-46P-201ENST00000517038 113 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA31.24-201ENST00000517232 57 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD53B-201ENST00000577887 78 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 MIR4753-201ENST00000585119 83 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC011494.1-201ENST00000596454 237 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 AC064807.4-201ENST00000607201 407 ntBASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.95□□□□□ -2.26
CHTOPQ9Y3Y2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 MIR504-201ENST00000385065 83 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA40.3-201ENST00000390964 122 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA67.6-201ENST00000391093 99 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 HMGN1P14-201ENST00000412459 517 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AC009961.2-201ENST00000435771 251 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AC013470.1-201ENST00000453438 462 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 RAP1BP2-201ENST00000478270 544 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AK3P2-201ENST00000507976 429 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 RNA5SP384-201ENST00000516615 116 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-295P-201ENST00000516901 104 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AL442163.3-201ENST00000554110 156 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AC005771.1-201ENST00000585581 349 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 AP001506.1-201ENST00000615444 211 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
CHTOPQ9Y3Y2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-534P-201ENST00000364877 106 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-715P-201ENST00000365204 103 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-169P-201ENST00000365336 107 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-297P-201ENST00000384636 107 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-550P-201ENST00000391057 101 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RPS29P13-201ENST00000402041 169 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-248P-201ENST00000410720 107 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RPL23AP95-201ENST00000426806 265 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 SNAP23P1-201ENST00000433229 246 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL031274.1-201ENST00000450334 232 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 HMGN1P12-201ENST00000499125 195 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-1146P-201ENST00000516282 102 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC068338.1-201ENST00000565567 176 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 MIR3682-201ENST00000581338 84 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL158827.2-201ENST00000602494 330 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 CTHRC1P1-201ENST00000605383 469 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC009994.1-201ENST00000606889 253 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AC073114.1-201ENST00000612027 490 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL158063.1-201ENST00000615349 536 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 Z69908.1-201ENST00000622603 247 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 AL691447.3-201ENST00000635020 330 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 ELL2P3-201ENST00000457883 1602 ntBASIC0.93□□□□□ -2.26
CHTOPQ9Y3Y2 Y_RNA.77-201ENST00000362962 107 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA4.2-201ENST00000365313 147 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-418P-201ENST00000384035 107 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 Y_RNA.480-201ENST00000384364 102 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms