Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC010620.1-201ENST00000601088 1102 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 FER-210ENST00000628534 558 ntTSL 5 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC121333.1-201ENST00000567488 2709 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 SNORA70.4-201ENST00000365509 134 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MIR483-201ENST00000385070 76 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 EIF4E2P1-201ENST00000393781 255 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MIR300-201ENST00000401138 83 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 RNU2-66P-201ENST00000410650 161 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 RN7SKP101-201ENST00000411376 320 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 C8orf59P1-201ENST00000429930 303 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MTND3P16-201ENST00000452205 344 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 RPS29P11-201ENST00000496507 171 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC067942.3-201ENST00000512025 362 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC110588.1-201ENST00000559699 137 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC026470.2-201ENST00000561492 181 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MTND1P15-201ENST00000579262 949 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AP005136.1-201ENST00000579765 429 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AL353149.1-201ENST00000610667 244 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC013412.1-201ENST00000610687 192 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC005562.2-201ENST00000618264 111 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 AC073534.2-201ENST00000620377 381 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 MIR6863-201ENST00000636112 90 ntBASIC1.34□□□□□ -2.19
KCNIP3Q9Y2W7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.34□□□□□ -2.2
KCNIP3Q9Y2W7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KCNIP3Q9Y2W7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-545P-201ENST00000362681 104 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-862P-201ENST00000362804 105 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-1085P-201ENST00000363576 107 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-259P-201ENST00000383999 107 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 SNORD116-1-201ENST00000384335 95 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 MIR9-3-201ENST00000385084 90 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 MIR1283-1-201ENST00000408494 87 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RN7SKP223-201ENST00000410582 62 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNA5SP494-201ENST00000410653 129 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 MTCO1P20-201ENST00000425366 358 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AMD1P1-201ENST00000457220 922 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC092436.3-201ENST00000511788 257 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 RNU2-34P-201ENST00000516534 121 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 CPDP1-201ENST00000579660 283 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC100830.2-201ENST00000581636 240 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 FGF7P1-201ENST00000582820 288 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 FAM157A-202ENST00000615155 405 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 AL359880.1-201ENST00000621879 266 ntBASIC1.33□□□□□ -2.2
KCNIP3Q9Y2W7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.123-201ENST00000363338 102 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-414P-201ENST00000363705 104 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-522P-201ENST00000364497 107 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-877P-201ENST00000383868 107 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-214P-201ENST00000384130 107 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 MTCO3P40-201ENST00000392516 676 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AL117342.1-201ENST00000404861 406 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-325P-201ENST00000411132 105 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 MRPS10P2-201ENST00000431226 381 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC003989.2-201ENST00000440224 169 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 SRRM1P2-201ENST00000464531 1192 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RPL26P26-201ENST00000480251 434 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC087241.4-201ENST00000612441 480 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 Z99129.1-201ENST00000612510 255 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms