Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-787P-201ENST00000384032 107 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-166P-201ENST00000384371 107 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 SNORA70E-201ENST00000384492 135 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 MIR183-201ENST00000384958 110 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AL512633.1-201ENST00000399931 655 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-383P-201ENST00000410864 94 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 Y_RNA.622-201ENST00000411091 108 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AC243964.1-201ENST00000441814 261 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 SNRPGP8-201ENST00000454064 226 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 RPL39P39-201ENST00000455840 151 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 RPL21P10-201ENST00000463521 490 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AC022137.1-201ENST00000483735 151 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 UBE2CP3-201ENST00000502715 450 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 RNA5SP179-201ENST00000517284 121 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AC087499.8-201ENST00000578406 226 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AL049781.1-201ENST00000623195 3585 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 IPO8P1-201ENST00000455509 3109 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-454P-201ENST00000364292 107 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 SNORD32A-201ENST00000364805 84 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 SNORD18B-201ENST00000365659 72 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 MIR153-1-201ENST00000384914 90 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 MT-TC-201ENST00000387405 66 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP475-201ENST00000410568 110 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 AL139247.1-201ENST00000422768 325 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 HMGN2P31-201ENST00000432430 273 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 FABP5P15-201ENST00000453566 214 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-504P-201ENST00000516568 104 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 U3.45-201ENST00000607547 219 ntBASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDZRN3Q9UPQ7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 LINC02471-203ENST00000641941 4752 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.17-201ENST00000362433 111 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP399-201ENST00000364003 117 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.368-201ENST00000365547 113 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 AL133162.1-201ENST00000463228 453 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 AC091179.3-201ENST00000474761 144 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 Vault.1-201ENST00000516474 102 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP367-201ENST00000516557 118 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 SNORA31.19-201ENST00000517079 126 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 MIR5571-201ENST00000577998 113 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 AC091167.4-201ENST00000605079 184 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.818-201ENST00000618813 71 ntBASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDZRN3Q9UPQ7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MIR367-201ENST00000362299 68 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.107-201ENST00000363190 121 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.342-201ENST00000365352 113 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 CBX3P9-201ENST00000402326 552 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 SNORA11.2-201ENST00000408318 127 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MIR1263-201ENST00000408324 86 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 RPL23AP95-201ENST00000426806 265 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 AL591419.1-201ENST00000427423 339 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 AC083863.1-201ENST00000438811 231 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 AC106707.2-201ENST00000484182 374 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 VWA8P1-201ENST00000510889 176 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 RN7SKP277-201ENST00000516895 283 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP54-201ENST00000516951 92 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MIR5187-201ENST00000583479 76 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MIR5195-201ENST00000583555 115 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 AL035470.1-201ENST00000622571 220 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MIR2052-201ENST00000636055 55 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 U6.105-201ENST00000637379 88 ntBASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.94□□□□□ -1.62
PDZRN3Q9UPQ7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-527P-201ENST00000363425 104 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP322-201ENST00000363617 119 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNU5F-3P-201ENST00000363767 117 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP167-201ENST00000365461 116 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 U1.1-201ENST00000384101 164 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.528-201ENST00000384575 108 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNU1-89P-201ENST00000384592 164 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 AL031003.1-201ENST00000404229 172 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 MIR1251-201ENST00000408552 70 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RPS29P4-201ENST00000414733 161 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 AC007560.1-201ENST00000426912 237 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 HMGB1P37-201ENST00000439613 609 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 BX276092.4-201ENST00000452056 248 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 AC107297.1-201ENST00000459991 176 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-857P-201ENST00000515893 110 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 MIR3200-201ENST00000580767 85 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 AL591424.2-201ENST00000617023 128 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 MIR7975-201ENST00000619350 68 ntBASIC4.93□□□□□ -1.62
PDZRN3Q9UPQ7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms