Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HMGB3P17-201ENST00000504195 649 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 SNORA40.9-201ENST00000515895 93 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 SNRPGP20-201ENST00000604477 205 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AC069200.1-201ENST00000609511 323 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AC099654.7-201ENST00000635788 2127 ntBASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.42□□□□□ -1.86
PPARGC1AQ9UBK2 AL109809.4-201ENST00000603520 2185 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 RNA5SP383-201ENST00000362934 120 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 SNORD56.3-201ENST00000363507 71 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 RNU6-102P-201ENST00000384485 104 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 RNU4-70P-201ENST00000384579 139 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 RNU6-21P-201ENST00000384710 107 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 MIR34B-201ENST00000385076 84 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 MIR767-201ENST00000390228 109 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 PRSS3P4-201ENST00000453323 162 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC091153.1-201ENST00000466297 402 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC026470.2-201ENST00000561492 181 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC098479.1-201ENST00000609225 154 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PPARGC1AQ9UBK2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PPARGC1AQ9UBK2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PPARGC1AQ9UBK2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
PPARGC1AQ9UBK2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PPARGC1AQ9UBK2 RNU1-62P-201ENST00000362599 164 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 Y_RNA.117-201ENST00000363294 101 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-529P-201ENST00000363383 104 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-338P-201ENST00000383888 105 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 MIR208B-201ENST00000401172 77 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 RNA5SP201-201ENST00000410316 124 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 AIMP1P2-201ENST00000425294 312 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 RN7SL601P-201ENST00000471221 293 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-138P-201ENST00000515952 107 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 SNORA25.14-201ENST00000516481 132 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 AC022080.3-201ENST00000544433 482 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 MIR3944-201ENST00000581277 108 ntBASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PPARGC1AQ9UBK2 ZNF204P-201ENST00000416749 2397 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-626P-201ENST00000363354 107 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 Y_RNA.179-201ENST00000363844 90 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-20P-201ENST00000384106 107 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6-793P-201ENST00000384233 104 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 CBX3P9-201ENST00000402326 552 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AC005326.1-201ENST00000429197 123 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AC010095.1-201ENST00000443543 144 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU7-110P-201ENST00000516891 62 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RNU2-31P-201ENST00000516954 155 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AL162713.1-201ENST00000604480 262 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AC010900.2-201ENST00000604508 210 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 MTND5P35-201ENST00000557537 1720 ntBASIC3.39□□□□□ -1.87
PPARGC1AQ9UBK2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 AL139109.1-201ENST00000455491 297 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 RPL7P49-201ENST00000471402 708 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 AC079598.5-201ENST00000547460 117 ntBASIC3.38□□□□□ -1.87
PPARGC1AQ9UBK2 AC027176.1-201ENST00000560204 514 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms