Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-1064P-201ENST00000410626 104 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC010095.1-201ENST00000443543 144 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.641-201ENST00000459414 105 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 SNORA25.12-201ENST00000516202 82 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC093331.1-201ENST00000521474 169 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 ZNF192P1-203ENST00000565888 810 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC055872.1-201ENST00000570978 278 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 LARP7P3-201ENST00000579888 337 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AC136601.2-201ENST00000604356 474 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AL357075.2-201ENST00000614906 189 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LMCD1Q9NZU5 AL359693.1-201ENST00000614959 2407 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 SNORA7.2-201ENST00000364446 145 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 Z98749.2-208ENST00000381646 500 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RNU6-142P-201ENST00000384019 107 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RNU6-211P-201ENST00000384047 107 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RPS27AP9-201ENST00000477681 438 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RAC1P2-201ENST00000511164 579 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 SNORA70.16-201ENST00000516390 95 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 Vault.1-201ENST00000516474 102 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RNU6-966P-201ENST00000516479 104 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RNU7-121P-201ENST00000516604 62 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 TRAV28-201ENST00000557548 323 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 LINC00933-203ENST00000559812 219 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 MIR3145-201ENST00000580727 82 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 AC068831.7-201ENST00000616954 363 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 MTND5P32-201ENST00000560711 1802 ntBASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMCD1Q9NZU5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 SNORD56.1-201ENST00000362913 68 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RNU6-942P-201ENST00000363002 107 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RNU6-270P-201ENST00000364131 105 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.238-201ENST00000364441 102 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 SNORD32A-201ENST00000364805 84 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.357-201ENST00000365487 109 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 MIR325-201ENST00000385260 98 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RN7SKP111-201ENST00000410349 271 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 AC138623.1-201ENST00000418060 216 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RPL30P13-201ENST00000418873 348 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 AC002075.2-201ENST00000425207 252 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 AC006026.2-201ENST00000457376 180 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 SNORA31.8-201ENST00000516327 108 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 AP004607.1-201ENST00000524456 203 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 DEFB131C-201ENST00000528817 165 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 MIR5582-201ENST00000579697 68 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 SNORA43.4-201ENST00000629559 138 ntBASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
LMCD1Q9NZU5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
LMCD1Q9NZU5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LMCD1Q9NZU5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.7-201ENST00000362352 102 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU4-35P-201ENST00000362588 141 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU4-80P-201ENST00000363200 141 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 SNORA72.2-201ENST00000365028 127 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 SNORA36A-201ENST00000384221 132 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU6-476P-201ENST00000384726 107 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU6-239P-201ENST00000390990 99 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU2-37P-201ENST00000410695 177 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AL590383.1-201ENST00000428602 75 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RPS15AP5-201ENST00000436276 388 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RN7SL429P-201ENST00000479090 223 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RN7SL489P-201ENST00000486185 223 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RN7SL327P-201ENST00000488659 223 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC093663.1-201ENST00000497190 394 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RNU6-589P-201ENST00000516485 107 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC115990.1-201ENST00000526957 301 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 MIR5680-201ENST00000577577 84 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 MIR5004-201ENST00000579078 107 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC090616.3-201ENST00000582184 217 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 RN7SL853P-201ENST00000617250 223 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 AC024581.2-201ENST00000619986 252 ntBASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LMCD1Q9NZU5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNU4-11P-201ENST00000365287 132 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms