Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 SNORD50.1-201ENST00000362987 71 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 Y_RNA.123-201ENST00000363338 102 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 Y_RNA.473-201ENST00000384333 102 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 SNORA51.11-201ENST00000384442 131 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNU1-148P-201ENST00000384472 162 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNU6-1274P-201ENST00000384557 107 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AL591034.2-201ENST00000402839 359 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 MTND4LP11-201ENST00000422184 280 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 Z82205.1-201ENST00000428456 297 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RPS3AP52-201ENST00000435639 297 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 CYCSP26-201ENST00000534107 320 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 IMMP1LP2-201ENST00000552954 492 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 POLR3GP2-201ENST00000588366 668 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AL356157.2-201ENST00000605122 111 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AC124303.1-201ENST00000605703 360 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 MIR6128-201ENST00000615528 109 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 AL353997.5-201ENST00000618886 171 ntBASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NLGN3Q9NZ94 RNA5SP99-201ENST00000364020 114 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 Y_RNA.474-201ENST00000384341 102 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 RNU6-933P-201ENST00000384424 107 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 RNU6-790P-201ENST00000384479 105 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 Y_RNA.504-201ENST00000384481 104 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 BTF3L4P2-201ENST00000392798 346 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL139396.1-201ENST00000421137 167 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL590135.1-201ENST00000422215 156 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC019205.3-201ENST00000424573 156 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC078809.1-201ENST00000427601 140 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 USP9YP30-201ENST00000430729 455 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 DAP3P1-201ENST00000441522 278 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL161788.1-201ENST00000441805 169 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC009238.1-201ENST00000442165 424 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC016700.2-201ENST00000446011 156 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC009237.6-201ENST00000446969 424 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC079354.2-201ENST00000453523 154 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC015911.1-201ENST00000495111 156 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC005741.1-201ENST00000511094 432 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 RNU6-875P-201ENST00000516488 106 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC105029.1-201ENST00000520250 669 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC115990.1-201ENST00000526957 301 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 MRPS36P4-201ENST00000534436 298 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 MIR3126-201ENST00000577443 74 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL034555.1-201ENST00000604816 211 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC009994.1-201ENST00000606889 253 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AC019193.3-201ENST00000609144 554 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AP000560.1-201ENST00000624150 1937 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
NLGN3Q9NZ94 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU4-15P-201ENST00000362613 141 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU1-23P-201ENST00000363361 144 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU6-944P-201ENST00000364023 107 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU6-842P-201ENST00000384269 107 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RNU6-784P-201ENST00000384330 106 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 U3.40-201ENST00000408706 208 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AL353572.1-201ENST00000442490 417 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 MTND4P18-201ENST00000447010 465 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC026782.1-201ENST00000512952 449 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 AC005668.1-201ENST00000571142 476 ntBASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NLGN3Q9NZ94 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms