Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC024614.3-201ENST00000637860 256 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC068137.4-201ENST00000638485 296 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 RNU4-12P-201ENST00000365233 139 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RNU6-1013P-201ENST00000384180 107 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RNU6-1093P-201ENST00000391194 107 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 MTCO3P18-201ENST00000440206 761 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 AC112492.4-201ENST00000456549 352 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 UBE2DNL-203ENST00000474922 222 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RNU2-34P-201ENST00000516534 121 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 CBX3P4-201ENST00000538909 354 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 AC023043.2-201ENST00000589678 1026 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 AC146944.4-201ENST00000602697 718 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RMST_3.1-201ENST00000611651 109 ntBASIC1.97□□□□□ -2.09
CHCHD3Q9NX63 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 RNU6-534P-201ENST00000364877 106 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 Y_RNA.516-201ENST00000384541 124 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 SNORA48.1-201ENST00000390879 135 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 RNU6-332P-201ENST00000391193 108 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP508-201ENST00000411327 119 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AL353572.1-201ENST00000442490 417 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 OR2AQ1P-201ENST00000451972 200 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 PCMTD1P1-201ENST00000455560 355 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 MIR449C-201ENST00000516047 92 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 RNU6-1098P-201ENST00000516772 96 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AP003465.2-201ENST00000602571 373 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AC005562.2-201ENST00000618264 111 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 AC009033.1-201ENST00000624279 431 ntBASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP493-201ENST00000364115 91 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AL589823.1-201ENST00000429577 183 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 RNU7-14P-201ENST00000459331 62 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 MIR3169-201ENST00000578032 83 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AC010928.2-201ENST00000588017 287 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 TCL6_2.1-201ENST00000615162 119 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 MTND4P5-201ENST00000435821 1374 ntBASIC1.95□□□□□ -2.1
CHCHD3Q9NX63 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 Y_RNA.295-201ENST00000364918 102 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 Y_RNA.453-201ENST00000384223 109 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 RNU6-790P-201ENST00000384479 105 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 RNU6-95P-201ENST00000384697 107 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC009310.1-201ENST00000414414 451 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AL357134.1-201ENST00000445848 426 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AL353705.4-201ENST00000449661 238 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 TOMM22P6-201ENST00000465035 409 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 RN7SL636P-201ENST00000497504 294 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 ACA59.1-201ENST00000515966 143 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 RNU6-1198P-201ENST00000516904 67 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 MIR4672-201ENST00000583126 81 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 SNRPGP20-201ENST00000604477 205 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AL033523.1-201ENST00000605153 153 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC025754.2-201ENST00000606491 432 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC090517.2-201ENST00000614966 680 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 AC139792.2-201ENST00000624218 587 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 SCARNA4-201ENST00000629045 128 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 IGHVIII-44-202ENST00000636235 289 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 MIR3688-2-201ENST00000636963 87 ntBASIC1.94□□□□□ -2.1
CHCHD3Q9NX63 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 Y_RNA.554-201ENST00000384672 102 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 UBE2V1P8-201ENST00000437166 265 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AC074290.1-201ENST00000448883 135 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 RNU7-187P-201ENST00000458985 68 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AC114982.1-201ENST00000469402 321 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP148-201ENST00000516527 94 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP54-201ENST00000516951 92 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AP005660.1-201ENST00000522972 293 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 MRPS36P4-201ENST00000534436 298 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms