Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AC012531.5-201ENST00000611375 151 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AP003355.3-201ENST00000623465 114 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AC006386.2-201ENST00000624491 75 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AC012005.1-201ENST00000624575 75 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 snoU18.1-201ENST00000629629 71 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 MIR3674-201ENST00000636576 68 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 IPO8P1-201ENST00000455509 3109 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 RNU6-804P-201ENST00000384286 107 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 RNU2-54P-201ENST00000410299 190 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 RNA5SP475-201ENST00000410568 110 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AC245291.1-201ENST00000419501 328 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 OOSP1P1-201ENST00000423265 274 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 RPS29P26-201ENST00000477483 171 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 IGKV2-26-201ENST00000518305 343 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AP000867.2-201ENST00000532468 320 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 DEFB117-201ENST00000602356 141 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 RNU6-91P-201ENST00000607774 107 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AC104465.1-201ENST00000611365 139 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 AL365265.1-201ENST00000621045 234 ntBASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TMEM39AQ9NV64 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.8-201ENST00000362353 102 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.40-201ENST00000362645 93 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.304-201ENST00000365011 112 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 RNU6-211P-201ENST00000384047 107 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.435-201ENST00000384095 112 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 RNU6-198P-201ENST00000384258 104 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 S100A11P2-201ENST00000467589 312 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 RNU6-1219P-201ENST00000516143 112 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 AP002001.1-203ENST00000534002 267 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 MIR3144-201ENST00000579460 79 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 AC007496.3-201ENST00000624987 3443 ntBASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM39AQ9NV64 AF127577.6-201ENST00000623352 2191 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNA5SP240-201ENST00000365355 128 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNY1P5-201ENST00000383890 115 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 MIR147B-201ENST00000390185 80 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 AC009963.1-201ENST00000417265 157 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNU7-23P-201ENST00000459465 62 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 AP002884.2-201ENST00000471647 395 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNU7-200P-201ENST00000516105 62 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 RNU6-346P-201ENST00000516288 111 ntBASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.87□□□□□ -1.79
TMEM39AQ9NV64 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AC010889.1-201ENST00000566193 2666 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 RNU6-1010P-201ENST00000362757 107 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 SNORD114-19-201ENST00000363072 75 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.415-201ENST00000384012 112 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 RNU1-89P-201ENST00000384592 164 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 MIR548I2-201ENST00000408348 149 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 RNU6-394P-201ENST00000410735 107 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 RNU6-107P-201ENST00000516643 102 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 MTND5P41-201ENST00000517498 206 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 PCGEM1.1-201ENST00000613431 131 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AC018692.3-201ENST00000623929 123 ntBASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM39AQ9NV64 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AC002546.1-201ENST00000588041 2504 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 RNU6-1248P-201ENST00000391096 64 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 RNA5SP201-201ENST00000410316 124 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms