Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.210-201ENST00000364161 110 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RNU6-281P-201ENST00000384212 103 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RNA5SP229-201ENST00000410809 99 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 COTL1P1-201ENST00000422309 375 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 AL353705.1-201ENST00000433468 480 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RPL21P2-201ENST00000440049 481 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RPEP5-201ENST00000441137 268 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 AC023141.11-201ENST00000508864 202 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 RN7SKP49-201ENST00000516675 260 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 LARP7P3-201ENST00000579888 337 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 MIR3616-201ENST00000584070 92 ntBASIC3.08□□□□□ -1.92
CCM2LQ9NUG4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AL445305.1-201ENST00000432577 575 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 FCF1P4-201ENST00000448326 183 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC067942.3-201ENST00000512025 362 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 SNORA25.14-201ENST00000516481 132 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RNU6-635P-201ENST00000516651 102 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC008269.2-201ENST00000561915 1105 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC090517.1-201ENST00000569307 266 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 MIR4325-201ENST00000583049 90 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AL713866.2-201ENST00000603579 219 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 RAC1P9-201ENST00000604990 392 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AL162274.2-201ENST00000614406 332 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC005562.2-201ENST00000618264 111 ntBASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCM2LQ9NUG4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 RNA5SP361-201ENST00000362686 118 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.144-201ENST00000363521 113 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 RNU6-318P-201ENST00000384283 103 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 MTCYBP9-201ENST00000431021 303 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 AC010469.2-201ENST00000496412 480 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 MTCO2P24-201ENST00000515611 426 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 SNORA40.15-201ENST00000516884 107 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 RNU6-586P-201ENST00000517265 104 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 RPL17P51-201ENST00000605218 238 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 AC010999.1-201ENST00000611856 324 ntBASIC3.06□□□□□ -1.92
CCM2LQ9NUG4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 RNA5SP374-201ENST00000362939 125 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 MIR1302-3-201ENST00000408128 138 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AL513477.1-202ENST00000417061 214 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AC007395.1-201ENST00000451333 677 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.683-201ENST00000516508 93 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 HSPE1P18-201ENST00000517602 280 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 AC010205.1-201ENST00000616668 449 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCM2LQ9NUG4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RNU6-461P-201ENST00000364195 107 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 SNORA18.3-201ENST00000384122 132 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RNU6-793P-201ENST00000384233 104 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 Y_RNA.574-201ENST00000384766 95 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 MRPL35P1-201ENST00000404272 572 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 SNORD12B-201ENST00000410433 91 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 CYP2C59P-201ENST00000457790 269 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RN7SL504P-201ENST00000494496 287 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 AC083906.5-201ENST00000503722 328 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 FCF1P8-201ENST00000510322 597 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 RNU6-397P-201ENST00000516226 104 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 CYCSP23-201ENST00000519781 313 ntBASIC3.04□□□□□ -1.92
CCM2LQ9NUG4 MIR5680-201ENST00000577577 84 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms