Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 EIF1P1-201ENST00000421436 341 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AL133396.1-201ENST00000432048 687 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 MTCO2P3-201ENST00000442543 421 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC027575.1-201ENST00000481064 460 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 MTND1P5-201ENST00000517906 940 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AP003465.2-201ENST00000602571 373 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AL078605.1-201ENST00000603529 500 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 DISC2.1-201ENST00000612827 205 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC007014.2-201ENST00000615581 479 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 SNORD32B-201ENST00000364460 84 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.615-201ENST00000410769 117 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RPS29P25-201ENST00000481709 171 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC083904.1-201ENST00000487828 231 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC091874.1-201ENST00000511402 339 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.665-201ENST00000516177 98 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RNU6-1069P-201ENST00000516612 133 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AL121757.2-201ENST00000611223 313 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 AC092794.1-201ENST00000612734 582 ntBASIC1.89□□□□□ -2.11
HPS4Q9NQG7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HPS4Q9NQG7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC092268.1-201ENST00000342691 405 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 RNU6-1106P-201ENST00000390845 107 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AL358453.1-201ENST00000422522 250 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 MRPS10P2-201ENST00000431226 381 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 ERLEC1P1-201ENST00000433806 578 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 RNU6-1208P-201ENST00000459588 107 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 HMGN2P26-201ENST00000463169 339 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC069439.1-201ENST00000494739 167 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.654-201ENST00000497848 106 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 MTCYBP18-201ENST00000501056 747 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC091885.1-201ENST00000506658 268 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC093259.1-201ENST00000509755 300 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 MIR449C-201ENST00000516047 92 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AC007375.1-201ENST00000554513 578 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 MIR4498-201ENST00000577599 66 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 BNIP3P25-201ENST00000596023 559 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 AP000907.4-201ENST00000604143 237 ntBASIC1.88□□□□□ -2.11
HPS4Q9NQG7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HPS4Q9NQG7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 RNU4-56P-201ENST00000364700 142 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 RNU6-877P-201ENST00000383868 107 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 SNORA26.3-201ENST00000391119 136 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 RNU6-332P-201ENST00000391193 108 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 MTCYBP2-201ENST00000407745 171 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 MIR1277-201ENST00000408536 78 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AP000275.1-201ENST00000411943 390 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms