Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC023141.12-201ENST00000512399 199 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-107P-201ENST00000516643 102 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-579P-201ENST00000516879 102 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MIR4444-1-201ENST00000581696 74 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MIR4444-2-201ENST00000584390 74 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-4P-201ENST00000606190 192 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC108706.1-201ENST00000611053 297 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.15-201ENST00000611544 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.16-201ENST00000613119 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.12-201ENST00000613778 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.9-201ENST00000615427 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.11-201ENST00000616345 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.2-201ENST00000616535 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.3-201ENST00000617785 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.19-201ENST00000618602 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-1-201ENST00000618664 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.6-201ENST00000619225 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.5-201ENST00000619465 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U2.10-201ENST00000620268 191 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 U4.6-201ENST00000621618 127 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
SEC61A2Q9H9S3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.272-201ENST00000364696 102 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.441-201ENST00000384123 112 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 RNA5SP475-201ENST00000410568 110 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC007215.1-201ENST00000464893 276 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 CYCSP23-201ENST00000519781 313 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 CYP4A27P-201ENST00000567218 190 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 MIR3674-201ENST00000636576 68 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A2Q9H9S3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 CUL1P1-201ENST00000509510 2425 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-324P-201ENST00000363957 106 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-81P-201ENST00000365608 104 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-1081P-201ENST00000384537 107 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-54P-201ENST00000410299 190 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RPS29P4-201ENST00000414733 161 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC009963.1-201ENST00000417265 157 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 HMGN2P7-201ENST00000456186 273 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC140059.1-201ENST00000489238 361 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AIG1P1-201ENST00000503376 148 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 MIR5692C2-201ENST00000577959 77 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 HSPE1P7-201ENST00000604681 321 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 AC004944.1-201ENST00000517807 3059 ntBASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
SEC61A2Q9H9S3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-487P-201ENST00000365430 104 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-245P-201ENST00000384020 107 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 CBX3P9-201ENST00000402326 552 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AC023141.4-201ENST00000412031 328 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms