Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 RPS29P2-201ENST00000479278 136 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AC020914.4-201ENST00000597690 277 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 RNU2-4P-201ENST00000606190 192 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.15-201ENST00000611544 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.16-201ENST00000613119 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.12-201ENST00000613778 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.9-201ENST00000615427 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.11-201ENST00000616345 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.2-201ENST00000616535 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.3-201ENST00000617785 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.19-201ENST00000618602 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 RNU2-1-201ENST00000618664 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.6-201ENST00000619225 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.5-201ENST00000619465 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 U2.10-201ENST00000620268 191 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 MIR7157-201ENST00000635801 60 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 AC103988.1-201ENST00000566382 2177 ntBASIC4.12□□□□□ -1.75
VRTNQ9H8Y1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.121-201ENST00000363309 113 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 RNU6-312P-201ENST00000364629 107 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.341-201ENST00000365341 102 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 AL357075.1-201ENST00000404107 726 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 RNU6-855P-201ENST00000410395 104 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 MICF-203ENST00000432679 129 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 AL135790.2-201ENST00000437701 267 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 RPS29P12-201ENST00000460178 152 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 SNORA70.12-201ENST00000516084 153 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 MIR5685-201ENST00000579080 79 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 MIR3684-201ENST00000579779 74 ntBASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
VRTNQ9H8Y1 AL049781.1-201ENST00000623195 3585 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AP003122.5-201ENST00000527668 3766 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AL161912.2-201ENST00000565707 3007 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.368-201ENST00000365547 113 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 MTCO2P33-201ENST00000402100 465 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 MIR1185-2-201ENST00000408687 86 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AL606753.1-201ENST00000427435 87 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 RNU7-14P-201ENST00000459331 62 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC146507.2-201ENST00000460608 476 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 RPL27AP5-201ENST00000469428 449 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 MIR449C-201ENST00000516047 92 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC100767.1-201ENST00000528178 123 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC106785.1-201ENST00000565935 262 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC087499.8-201ENST00000578406 226 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AL137849.1-201ENST00000604767 169 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 AC134026.1-201ENST00000623249 2239 ntBASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.182-201ENST00000363880 111 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.293-201ENST00000364908 93 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 SNORA72.4-201ENST00000384174 132 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 Y_RNA.456-201ENST00000384232 111 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 MIR30B-201ENST00000384850 88 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 MIR300-201ENST00000401138 83 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 U3.39-201ENST00000408569 239 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 AL500522.2-201ENST00000448562 343 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 HMGN2P9-201ENST00000476875 229 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 SCARNA3-201ENST00000517097 143 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 SNORA62.6-201ENST00000606322 83 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.09□□□□□ -1.75
VRTNQ9H8Y1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VRTNQ9H8Y1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VRTNQ9H8Y1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC058791.1-201ENST00000608412 3198 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.75-201ENST00000362927 97 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RNA5SP322-201ENST00000363617 119 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RNU6-899P-201ENST00000363947 107 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.272-201ENST00000364696 102 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.361-201ENST00000365515 120 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms