Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC083798.1-201ENST00000472671 131 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC096745.1-201ENST00000509945 370 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 FAM206BP-201ENST00000510179 541 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 RNU6-189P-201ENST00000516120 101 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 NBR2-204ENST00000587322 63 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC092747.3-201ENST00000603769 301 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 MIR8070-201ENST00000616510 88 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 U1.36-201ENST00000620684 176 ntBASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP3Q9H6T3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
RPAP3Q9H6T3 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC092268.1-201ENST00000342691 405 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU4-56P-201ENST00000364700 142 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU4-20P-201ENST00000365601 151 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU6-38P-201ENST00000384085 107 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU6-378P-201ENST00000384324 107 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 SNORA26.3-201ENST00000391119 136 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 MTCO2P3-201ENST00000442543 421 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU6-333P-201ENST00000459117 107 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNU6-261P-201ENST00000459506 102 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC016632.1-201ENST00000503994 196 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 RNA5SP490-201ENST00000517141 136 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 CENPUP1-201ENST00000526649 1202 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC025423.5-201ENST00000550230 219 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AL022345.1-201ENST00000607292 135 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC103591.3-201ENST00000608684 209 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AC064836.2-201ENST00000609491 462 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 AL450472.1-202ENST00000637286 180 ntBASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.77□□□□□ -2.13
RPAP3Q9H6T3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNU6-82P-201ENST00000363970 107 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNU6-26P-201ENST00000383985 107 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNU6-780P-201ENST00000391030 104 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 CALM2P3-201ENST00000400429 449 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AL357139.1-201ENST00000407792 426 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 MIR1287-201ENST00000408492 90 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNA5SP201-201ENST00000410316 124 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNA5SP501-201ENST00000410990 112 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AP000275.1-201ENST00000411943 390 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 RNU6-323P-201ENST00000521915 107 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AP005597.4-201ENST00000526762 229 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AL161670.1-201ENST00000554348 137 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 MIR3923-201ENST00000579521 83 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AL357078.3-201ENST00000607528 618 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AL590240.4-201ENST00000616908 390 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 AC103705.1-201ENST00000619013 241 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 OR5AK4P-201ENST00000635912 903 ntBASIC1.76□□□□□ -2.13
RPAP3Q9H6T3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 RNU2-41P-201ENST00000410991 178 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 MTND3P9-201ENST00000429526 346 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 SNRPEP8-201ENST00000442866 260 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AC132942.1-201ENST00000486753 483 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AC008628.2-201ENST00000502605 298 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 AC124864.2-201ENST00000624736 186 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 SNORA43.4-201ENST00000629559 138 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPAP3Q9H6T3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 MTCO3P40-201ENST00000392516 676 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms