Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNU2-16P-201ENST00000410712 136 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 SNRPEP8-201ENST00000442866 260 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AC074290.1-201ENST00000448883 135 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 ATP5J2P3-201ENST00000451550 258 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 HMGN2P23-201ENST00000456759 269 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 TOMM22P6-201ENST00000465035 409 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AC097473.1-201ENST00000508142 408 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 RNA5SP364-201ENST00000516938 78 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AC024909.2-201ENST00000553035 286 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 AC124864.2-201ENST00000624736 186 ntBASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP4AQ9BY43 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 RNA5SP138-201ENST00000365098 114 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 MIR520A-201ENST00000384862 85 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 MIR320B2-201ENST00000408479 138 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 TIMM9P3-201ENST00000428659 274 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 UBE2V1P8-201ENST00000437166 265 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 HSPE1P21-201ENST00000438283 308 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 RPL36AP21-201ENST00000490372 323 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 AC021146.2-201ENST00000504736 556 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 ATP5EP1-201ENST00000510257 156 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 RNU6-1069P-201ENST00000516612 133 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 AC092747.3-201ENST00000603769 301 ntBASIC2.46□□□□□ -2.02
CHMP4AQ9BY43 MTND4P1-201ENST00000457501 1466 ntBASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 SCOCP1-201ENST00000554676 349 ntBASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 ANP32BP3-201ENST00000559213 706 ntBASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
CHMP4AQ9BY43 RNU6-112P-201ENST00000363599 104 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 RNU4-42P-201ENST00000364738 142 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 RNU6-338P-201ENST00000383888 105 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 RNU6-214P-201ENST00000384130 107 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 RNU6-360P-201ENST00000390944 104 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 CALM2P3-201ENST00000400429 449 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 AL445685.2-201ENST00000422551 342 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 AL359672.1-201ENST00000442302 409 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 AC007677.1-201ENST00000445757 515 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 snoU13.9-201ENST00000458927 103 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 RPL9P9-202ENST00000466501 579 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 SNORA31.17-201ENST00000516953 127 ntBASIC2.44□□□□□ -2.02
CHMP4AQ9BY43 AL159152.1-201ENST00000635019 2587 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 SNORD33-201ENST00000362761 85 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 Y_RNA.194-201ENST00000363985 102 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 RNA5SP160-201ENST00000364866 120 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 Y_RNA.378-201ENST00000365652 113 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 RNU6-38P-201ENST00000384085 107 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 RNU6-1093P-201ENST00000391194 107 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 USP9YP28-201ENST00000435142 589 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AC067942.3-201ENST00000512025 362 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AC025465.4-201ENST00000513422 638 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 SNORA19.2-201ENST00000516013 114 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 RNU6-323P-201ENST00000521915 107 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AL512360.1-201ENST00000555346 234 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AL118558.2-201ENST00000556294 238 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AL357078.3-201ENST00000607528 618 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AC104458.1-201ENST00000608243 463 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AC083806.3-201ENST00000614016 455 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 AL359880.1-201ENST00000621879 266 ntBASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.43□□□□□ -2.02
CHMP4AQ9BY43 MIR424-201ENST00000362227 98 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 SNORA72.2-201ENST00000365028 127 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AC016907.1-201ENST00000419483 435 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AC010409.1-201ENST00000487382 476 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AC091874.1-201ENST00000511402 339 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 RPL39P5-202ENST00000512505 151 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 RNU6-856P-201ENST00000516959 98 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AC100830.2-201ENST00000581636 240 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 MIR4753-201ENST00000585119 83 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AL353149.1-201ENST00000610667 244 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 AC005562.2-201ENST00000618264 111 ntBASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP4AQ9BY43 Y_RNA.67-201ENST00000362870 100 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU4-75P-201ENST00000364621 146 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU4-20P-201ENST00000365601 151 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU6-1329P-201ENST00000365664 107 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU6-1286P-201ENST00000383871 107 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 MIR515-2-201ENST00000384883 83 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 MIR515-1-201ENST00000384884 83 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 EIF4E2P1-201ENST00000393781 255 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 MIR1267-201ENST00000408723 78 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 DLGAP5P1-201ENST00000430307 464 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 RNU6-717P-201ENST00000459076 104 ntBASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP4AQ9BY43 AC025423.5-201ENST00000550230 219 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms