Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNY3P1-201ENST00000365085 102 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RNY3-201ENST00000365484 102 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.535-201ENST00000384612 99 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 MIR95-201ENST00000385072 81 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 MIR153-2-201ENST00000385225 87 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AL359511.1-201ENST00000402970 211 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC007098.1-201ENST00000420122 367 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 OR2AQ1P-201ENST00000451972 200 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC132942.1-201ENST00000486753 483 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC145146.1-201ENST00000496370 254 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 HMGN1P13-201ENST00000505795 138 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RPPH1-2P-201ENST00000516688 293 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC023824.2-201ENST00000566185 400 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC090616.3-201ENST00000582184 217 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AL356575.1-201ENST00000603008 283 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AL133255.1-201ENST00000606374 441 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 U4atac.1-201ENST00000618345 95 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 RNU6-890P-201ENST00000384121 107 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.473-201ENST00000384333 102 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AL356320.1-201ENST00000429616 163 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AL353752.1-201ENST00000454946 260 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AC068781.1-201ENST00000488231 618 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 RN7SL636P-201ENST00000497504 294 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 RNA5SP384-201ENST00000516615 116 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.706-201ENST00000516933 99 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 RNU6-1213P-201ENST00000517075 94 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 EIF4A1P12-201ENST00000551910 141 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AC026470.2-201ENST00000561492 181 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 AL355297.2-201ENST00000604792 129 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.09□□□□□ -1.91
RTFDC1Q9BY42 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RTFDC1Q9BY42 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RTFDC1Q9BY42 RNU4-15P-201ENST00000362613 141 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 RNA5SP201-201ENST00000410316 124 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 RPL19P1-201ENST00000411635 428 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AF186996.7-201ENST00000492781 209 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 RNA5SP54-201ENST00000516951 92 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AC091144.1-201ENST00000519573 138 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AC018630.3-201ENST00000542637 96 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 SUB1P3-201ENST00000564581 315 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RTFDC1Q9BY42 AC007336.1-201ENST00000576365 3828 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AC135776.4-201ENST00000624300 1904 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 RNU6-490P-201ENST00000362985 107 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 RNU6-1040P-201ENST00000383974 107 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 SNORA36A-201ENST00000384221 132 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 RNU6-331P-201ENST00000384724 107 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 MIR561-201ENST00000385216 97 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 SNORA46.1-201ENST00000391069 153 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AC099799.1-201ENST00000439809 192 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 snoU13.23-201ENST00000458863 104 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 MIR5701-3-201ENST00000578890 82 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 MIR5701-1-201ENST00000585138 82 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AC005014.2-201ENST00000607795 599 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 PCGEM1.1-201ENST00000613431 131 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 MIR5701-2-201ENST00000615634 82 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AL160413.1-201ENST00000622780 310 ntBASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
RTFDC1Q9BY42 AC016717.2-201ENST00000609089 5141 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 Y_RNA.577-201ENST00000384794 101 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 MTCO3P10-201ENST00000455912 772 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 AC022493.2-201ENST00000506122 481 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 RNU6-470P-201ENST00000515954 104 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 RNU7-4P-201ENST00000516961 62 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms