Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 RNU7-138P-201ENST00000459479 64 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 RPL23AP63-201ENST00000498752 471 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 RNU6-875P-201ENST00000516488 106 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC087854.1-201ENST00000519706 414 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC104576.1-201ENST00000524225 88 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 CR383656.8-201ENST00000549046 145 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 U4atac.1-201ENST00000618345 95 ntBASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RSPO3Q9BXY4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 RNU6-336P-201ENST00000364891 107 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 SNORD116-20-201ENST00000384529 92 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 RNU6-95P-201ENST00000384697 107 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 RAP1BP3-201ENST00000407180 549 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC074117.2-201ENST00000417130 397 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC098614.3-201ENST00000438957 440 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC007969.2-201ENST00000441891 191 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AL031274.1-201ENST00000450334 232 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AMD1P1-201ENST00000457220 922 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 MED28P2-201ENST00000475771 317 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC103851.1-201ENST00000506833 274 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AP004607.1-201ENST00000524456 203 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 COPS8P3-201ENST00000526024 482 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC007151.1-201ENST00000572774 483 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC023043.2-201ENST00000589678 1026 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 AC104260.1-201ENST00000616660 539 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 SCARNA4-202ENST00000625402 129 ntBASIC1.53□□□□□ -2.16
RSPO3Q9BXY4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-858P-201ENST00000362436 107 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 SNORD56.1-201ENST00000362913 68 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-105P-201ENST00000363909 104 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.339-201ENST00000365325 102 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-622P-201ENST00000384272 103 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-843P-201ENST00000384454 104 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-692P-201ENST00000384496 107 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-19P-201ENST00000384718 107 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-510P-201ENST00000391239 108 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RPS29P13-201ENST00000402041 169 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AL356432.1-201ENST00000405809 419 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.604-201ENST00000410574 102 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU4-14P-201ENST00000410858 122 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-321P-201ENST00000410912 106 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC009161.1-201ENST00000417306 376 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 PTGES3P4-201ENST00000426243 356 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC243964.1-201ENST00000441814 261 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 MTND3P10-201ENST00000450967 341 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU7-187P-201ENST00000458985 68 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AP001324.2-201ENST00000461163 319 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC008526.1-201ENST00000509149 338 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC046134.1-201ENST00000514454 666 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 SNORA25.11-201ENST00000515935 105 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-377P-201ENST00000515965 102 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.682-201ENST00000516457 100 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNU6-566P-201ENST00000516790 107 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 SNORD19.2-201ENST00000516978 73 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 RNA5SP454-201ENST00000517231 127 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC069113.1-201ENST00000517763 267 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AP005639.2-201ENST00000527592 928 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 TRAV32-201ENST00000553993 340 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 SUB1P3-201ENST00000564581 315 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC100830.2-201ENST00000581636 240 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC091135.1-201ENST00000585943 307 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 AC093913.1-201ENST00000614178 329 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 MIR7111-201ENST00000619751 72 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 ZNF702P-202ENST00000434269 1966 ntBASIC1.52□□□□□ -2.17
RSPO3Q9BXY4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 RNU6-529P-201ENST00000363383 104 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.166-201ENST00000363730 102 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 RNU6-867P-201ENST00000364956 107 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 RNU6-234P-201ENST00000365229 104 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MIR499A-201ENST00000384903 122 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MIR548K-201ENST00000408406 116 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 RNU6-293P-201ENST00000411259 106 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms