Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 7SK.13-201ENST00000622040 250 ntBASIC0.82□□□□□ -2.28
CDCA4Q9BXL8 AL450472.1-202ENST00000637286 180 ntBASIC0.82□□□□□ -2.28
CDCA4Q9BXL8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 RNU6-1026P-201ENST00000384465 108 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 RPS29P13-201ENST00000402041 169 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AL117342.1-201ENST00000404861 406 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 ARL5AP1-201ENST00000418991 388 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC078809.1-201ENST00000427601 140 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 UBE2D3P4-201ENST00000441973 436 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC007395.1-201ENST00000451333 677 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 RNU6-1041P-201ENST00000516254 102 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 RNU6-856P-201ENST00000516959 98 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 MRPS36P3-201ENST00000519284 130 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 EIF4A1P12-201ENST00000551910 141 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC090517.1-201ENST00000569307 266 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 MIR548AB-201ENST00000584917 84 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 VN1R107P-201ENST00000601784 209 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 AC004223.4-201ENST00000612426 332 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 MIR6767-201ENST00000637302 66 ntBASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDCA4Q9BXL8 Y_RNA.504-201ENST00000384481 104 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC013410.2-201ENST00000422627 201 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AL593851.1-201ENST00000426171 157 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AL133396.1-201ENST00000432048 687 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 RPS29P15-201ENST00000458329 171 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC016632.1-201ENST00000503994 196 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 FABP5P5-201ENST00000515537 406 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 SNORD27.1-201ENST00000516319 72 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 RN7SKP265-201ENST00000516448 223 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC103996.1-201ENST00000555468 102 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 CYP4A27P-201ENST00000567218 190 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 AC022418.1-201ENST00000624118 445 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 SNORA43.4-201ENST00000629559 138 ntBASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDCA4Q9BXL8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-1214P-201ENST00000363650 109 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 Y_RNA.269-201ENST00000364685 89 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNY4P34-201ENST00000364779 95 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 SNORA4.2-201ENST00000365313 147 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-827P-201ENST00000365553 106 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 SNORA18.2-201ENST00000383865 132 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-877P-201ENST00000383868 107 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-74P-201ENST00000384235 107 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MIR518E-201ENST00000385252 88 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MIR454-201ENST00000390180 115 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RPL21P1-201ENST00000399532 476 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MIR208B-201ENST00000401172 77 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 Y_RNA.598-201ENST00000410480 95 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-195P-201ENST00000411352 109 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 GPR143P-201ENST00000434155 205 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AL596276.1-201ENST00000434465 418 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 USP9YP28-201ENST00000435142 589 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MTND2P39-201ENST00000457230 764 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC091435.1-201ENST00000505442 584 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AK3P2-201ENST00000507976 429 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MTCO3P7-201ENST00000510008 774 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNA5SP503-201ENST00000517047 117 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 MIR3664-201ENST00000579074 99 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 FAM106DP-201ENST00000586416 501 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC091805.2-201ENST00000603848 235 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 Z99289.3-201ENST00000605586 594 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC002044.1-201ENST00000606707 158 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC009994.1-201ENST00000606889 253 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC008147.4-201ENST00000617570 1204 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 AC126177.8-201ENST00000618339 1015 ntBASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CDCA4Q9BXL8 RNU6-1029P-201ENST00000384109 107 ntBASIC0.78□□□□□ -2.28
CDCA4Q9BXL8 AL356776.1-201ENST00000406574 447 ntBASIC0.78□□□□□ -2.28
CDCA4Q9BXL8 RNU4-46P-201ENST00000410818 138 ntBASIC0.78□□□□□ -2.28
CDCA4Q9BXL8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms