Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AP002001.1-203ENST00000534002 267 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RN7SL703P-201ENST00000578485 302 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 MIR3158-1-201ENST00000583596 81 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AC011471.1-201ENST00000585766 187 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AC069200.1-201ENST00000609511 323 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 MIR6500-201ENST00000622700 86 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 AC026241.1-201ENST00000517873 2142 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.568-201ENST00000384742 113 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 RNA5SP252-201ENST00000391131 119 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 U3.40-201ENST00000408706 208 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 RN7SKP202-201ENST00000410439 330 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 AIMP1P2-201ENST00000425294 312 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-313P-201ENST00000516317 112 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 SCARNA14-201ENST00000516903 136 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 MIR4474-201ENST00000579189 78 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 SNORD11B-201ENST00000607707 90 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 uc_338.32-201ENST00000615087 172 ntBASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM56Q9BRZ2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 SNORA62.3-201ENST00000365110 153 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.415-201ENST00000384012 112 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 SEPT7P4-201ENST00000437076 306 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 RPS3P1-201ENST00000456781 192 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-436P-201ENST00000516171 114 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-344P-201ENST00000516635 111 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 AC100767.1-201ENST00000528178 123 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 MIR3684-201ENST00000579779 74 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 PCGEM1.1-201ENST00000613431 131 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 MIR6875-201ENST00000617506 72 ntBASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM56Q9BRZ2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM56Q9BRZ2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM56Q9BRZ2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.84□□□□□ -1.8
TRIM56Q9BRZ2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-655P-201ENST00000362858 107 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 Y_RNA.215-201ENST00000364204 112 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 RNU1-57P-201ENST00000384491 166 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-763P-201ENST00000390865 106 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 AC079598.5-201ENST00000547460 117 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 EIF4A1P12-201ENST00000551910 141 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 MIR4444-1-201ENST00000581696 74 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 MIR4444-2-201ENST00000584390 74 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 RPL17P51-201ENST00000605218 238 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 AC005562.2-201ENST00000618264 111 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 MFSD8-236ENST00000641509 4050 ntBASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM56Q9BRZ2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 U3.9-201ENST00000363823 204 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-275P-201ENST00000364910 107 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-1154P-201ENST00000391001 104 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-131P-201ENST00000391144 107 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RNU6-710P-201ENST00000410424 105 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 CYCSP19-201ENST00000411715 316 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RPL31P41-201ENST00000477967 372 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 Y_RNA.797-201ENST00000515977 94 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 RN7SKP164-201ENST00000516138 266 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 TGIF1P1-201ENST00000558095 802 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 TCL6_2.1-201ENST00000615162 119 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 Y_RNA.778-201ENST00000620203 90 ntBASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM56Q9BRZ2 GABRG2-229ENST00000641017 3628 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms