Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC083806.3-201ENST00000614016 455 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AL590808.1-201ENST00000618696 141 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 SNORD115-32-201ENST00000364079 82 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.202-201ENST00000364083 110 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 SNORD114-30-201ENST00000364448 72 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 SNORA69.1-201ENST00000390904 137 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 MIR887-201ENST00000401258 79 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AL590004.1-201ENST00000405321 300 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC244505.4-201ENST00000434905 287 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 SSXP5-201ENST00000443473 287 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 Z96811.1-201ENST00000445880 108 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AL353752.1-201ENST00000454946 260 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC145146.1-201ENST00000496370 254 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 RNU1-41P-201ENST00000516161 162 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 RNU1-48P-201ENST00000516400 162 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 HSPE1P18-201ENST00000517602 280 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC091144.1-201ENST00000519573 138 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC107871.2-201ENST00000612894 502 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 MIR5739-201ENST00000619803 80 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 CTSLP2-204ENST00000629029 392 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC108206.1-201ENST00000570186 4159 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 AC069528.2-201ENST00000624849 1991 ntBASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
PAAF1Q9BRP4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.39-201ENST00000362620 98 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.132-201ENST00000363421 102 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 MIR29B2-201ENST00000385055 81 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 AC018865.2-201ENST00000423631 129 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 SNORD53-201ENST00000579969 78 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 AC007742.2-201ENST00000618226 398 ntBASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PAAF1Q9BRP4 AC008264.2-201ENST00000610193 3731 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.106-201ENST00000363189 100 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNY3P11-201ENST00000364153 102 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-461P-201ENST00000364195 107 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.216-201ENST00000364205 93 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.319-201ENST00000365138 92 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.364-201ENST00000365532 101 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 SNORA22B-201ENST00000383876 138 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-17P-201ENST00000384245 107 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-378P-201ENST00000384324 107 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-18P-201ENST00000384527 107 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 MIR627-201ENST00000384979 97 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 MIR628-201ENST00000385229 95 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC114482.1-201ENST00000418010 247 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 PMCHL1-202ENST00000423102 261 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC096644.2-201ENST00000429278 159 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC009969.1-201ENST00000438726 172 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 MTCYBP6-201ENST00000441810 138 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AP000705.1-201ENST00000454567 350 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 SNORA25.10-201ENST00000515926 124 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.711-201ENST00000516993 102 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 RNU6-586P-201ENST00000517265 104 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 MIR3616-201ENST00000584070 92 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC016925.2-201ENST00000605108 242 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC007485.1-201ENST00000616755 206 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AC008121.3-201ENST00000618726 433 ntBASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.68□□□□□ -1.98
PAAF1Q9BRP4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms