Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC245297.2-201ENST00000610119 565 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AL513423.1-201ENST00000621695 132 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 U4.7-201ENST00000638126 106 ntBASIC-0.04□□□□□ -2.42
VPS25Q9BRG1 AL442644.1-201ENST00000454390 3105 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RNU6-199P-201ENST00000362954 107 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RNU6-960P-201ENST00000364056 120 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RNU6-769P-201ENST00000384407 104 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RNU6-440P-201ENST00000390882 105 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RNA5SP219-201ENST00000390940 113 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 RN7SKP200-201ENST00000410564 320 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AC007283.2-201ENST00000424739 197 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AC000111.3-201ENST00000433478 193 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 SNRPGP12-201ENST00000449481 213 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AC093850.1-201ENST00000454121 251 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 MTND3P25-201ENST00000509243 135 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AC108729.3-201ENST00000513484 108 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 MIR5000-201ENST00000577717 103 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AC091965.4-201ENST00000607691 587 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AL391903.3-201ENST00000612158 163 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AL359547.2-201ENST00000615810 418 ntBASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS25Q9BRG1 AP000568.1-201ENST00000282964 442 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 RNY4P16-201ENST00000364768 94 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 RNU6-45P-201ENST00000384471 107 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC019070.1-201ENST00000415008 1024 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC114491.1-201ENST00000416095 246 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC002486.1-201ENST00000435098 391 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 MTCO2P18-201ENST00000457151 658 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC093534.1-201ENST00000504977 132 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC091874.1-201ENST00000511402 339 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 SNORA70.12-201ENST00000516084 153 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 MTND4LP26-201ENST00000518144 282 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 MTND3P13-201ENST00000574391 343 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC234772.3-201ENST00000602277 528 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC005776.1-201ENST00000603164 290 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 Z99497.2-201ENST00000603634 310 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC012409.4-201ENST00000612923 249 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC073349.3-201ENST00000617616 186 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 MIR6513-201ENST00000621188 64 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 FRG1KP-201ENST00000623592 341 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC093875.1-201ENST00000623688 504 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AL450472.1-202ENST00000637286 180 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 AC006927.2-201ENST00000639256 389 ntBASIC-0.06□□□□□ -2.42
VPS25Q9BRG1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-371P-201ENST00000364283 108 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 MIR549A-201ENST00000385268 96 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 MIR1283-1-201ENST00000408494 87 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AC245047.3-201ENST00000429428 127 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AL353718.1-201ENST00000451028 517 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 OR9P1P-201ENST00000496431 281 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AC109479.2-201ENST00000517842 174 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AC123904.2-201ENST00000548059 300 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 MIR4667-201ENST00000578933 66 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 MIR3192-201ENST00000584920 77 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 AC073539.2-201ENST00000597113 165 ntBASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS25Q9BRG1 RNU6-428P-201ENST00000362942 107 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RNU4-56P-201ENST00000364700 142 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RNU6-621P-201ENST00000364752 109 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 SNORD32A-201ENST00000364805 84 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RPS20P2-201ENST00000402520 389 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RNU6-177P-201ENST00000411257 104 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 MTCO2P34-201ENST00000421994 607 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 ISCA1P6-201ENST00000427740 390 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 MTND1P22-201ENST00000510572 951 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC106038.2-201ENST00000520706 568 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC013828.2-201ENST00000532487 235 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AL596327.1-201ENST00000603629 213 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC136443.5-201ENST00000603741 370 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 AC008133.2-201ENST00000624540 351 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 MIR924-201ENST00000638017 53 ntBASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
VPS25Q9BRG1 RNU6-552P-201ENST00000362869 119 ntBASIC-0.09□□□□□ -2.42
VPS25Q9BRG1 RNU6-224P-201ENST00000384055 107 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms