Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORA46-201ENST00000384762 135 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-159P-201ENST00000391080 106 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 MIR1298-201ENST00000408783 112 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.87□□□□□ -1.95
TIMP4Q99727 AC244670.1-201ENST00000436879 112 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC009969.1-201ENST00000438726 172 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RPL27AP5-201ENST00000469428 449 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AP001025.1-201ENST00000486139 332 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 SEPT14P8-201ENST00000508026 178 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.87□□□□□ -1.95
TIMP4Q99727 RN7SKP49-201ENST00000516675 260 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 SNORD59.2-201ENST00000516873 68 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-711P-201ENST00000517255 106 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.87□□□□□ -1.95
TIMP4Q99727 MIR5571-201ENST00000577998 113 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 MIR3609-201ENST00000582661 80 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.87□□□□□ -1.95
TIMP4Q99727 HSPE1P7-201ENST00000604681 321 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AL138963.2-201ENST00000605137 226 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC004792.1-201ENST00000614523 137 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.87□□□□□ -1.95
TIMP4Q99727 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 MIR3529-201ENST00000637713 78 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TIMP4Q99727 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
TIMP4Q99727 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 MIR422A-201ENST00000362286 90 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 SNORA7.4-201ENST00000384249 137 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 MIR549A-201ENST00000385268 96 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 AL133475.1-201ENST00000404414 305 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 NDUFB4P4-201ENST00000404822 243 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 RNU6-1140P-201ENST00000410517 106 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.86□□□□□ -1.95
TIMP4Q99727 S100A11P2-201ENST00000467589 312 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.86□□□□□ -1.95
TIMP4Q99727 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.86□□□□□ -1.95
TIMP4Q99727 AC011471.1-201ENST00000585766 187 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 SNORD113-5-201ENST00000607261 78 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 AL162274.2-201ENST00000614406 332 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 U2.14-201ENST00000615943 113 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TIMP4Q99727 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.86□□□□□ -1.95
TIMP4Q99727 AC110774.1-201ENST00000623567 2018 ntBASIC2.86□□□□□ -1.95
TIMP4Q99727 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TIMP4Q99727 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.85□□□□□ -1.95
TIMP4Q99727 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.85□□□□□ -1.95
TIMP4Q99727 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TIMP4Q99727 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TIMP4Q99727 RNU6-961P-201ENST00000363893 105 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RNY1-201ENST00000364228 113 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 Y_RNA.270-201ENST00000364693 104 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RNU6-20P-201ENST00000384106 107 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 MIR329-1-201ENST00000385028 80 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 SNORA53-201ENST00000391141 249 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 SNORD58.1-201ENST00000391313 66 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RNU5A-5P-201ENST00000411054 116 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AL139156.1-201ENST00000412785 841 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RPL32P35-201ENST00000415214 394 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.85□□□□□ -1.95
TIMP4Q99727 AC138623.1-201ENST00000418060 216 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.85□□□□□ -1.95
TIMP4Q99727 AC019205.3-201ENST00000424573 156 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AC078809.1-201ENST00000427601 140 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AL161651.1-201ENST00000440882 223 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AC010095.1-201ENST00000443543 144 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.85□□□□□ -1.95
TIMP4Q99727 AL138752.1-201ENST00000452964 351 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 RNA5SP341-201ENST00000516261 117 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 Y_RNA.700-201ENST00000516806 100 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.85□□□□□ -1.95
TIMP4Q99727 AC016256.1-201ENST00000547971 354 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AC026470.2-201ENST00000561492 181 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 UBL5P2-201ENST00000583788 219 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 AC107294.3-201ENST00000609211 526 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
TIMP4Q99727 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TIMP4Q99727 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TIMP4Q99727 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.85□□□□□ -1.95
TIMP4Q99727 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TIMP4Q99727 Y_RNA.83-201ENST00000363005 113 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 Y_RNA.199-201ENST00000364014 102 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 Y_RNA.569-201ENST00000384749 103 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 RNU1-101P-201ENST00000391171 127 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 Y_RNA.793-201ENST00000411222 111 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 AL358075.3-201ENST00000426289 226 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 AC073901.1-201ENST00000462471 408 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 RPL26P26-201ENST00000480251 434 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 RNU6-567P-201ENST00000516746 107 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 SNORA31.16-201ENST00000516773 139 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms