Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RNU5F-2P-201ENST00000516066 82 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 SNORA48.11-201ENST00000517015 89 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 RNU6-586P-201ENST00000517265 104 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.25□□□□□ -2.05
RAD9AQ99638 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.25□□□□□ -2.05
RAD9AQ99638 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 AC007375.1-201ENST00000554513 578 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 AC005668.1-201ENST00000571142 476 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 AC005730.3-201ENST00000583067 366 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 MIR3136-201ENST00000583498 78 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 MIR3976-201ENST00000606807 139 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 AC009541.1-201ENST00000438279 2662 ntBASIC2.25□□□□□ -2.05
RAD9AQ99638 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RAD9AQ99638 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 SNORA72.1-201ENST00000363485 129 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 Y_RNA.166-201ENST00000363730 102 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 Y_RNA.303-201ENST00000364998 94 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 RNU6-1032P-201ENST00000384100 107 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 Y_RNA.504-201ENST00000384481 104 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 MIR517A-201ENST00000385001 87 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 MIR29B2-201ENST00000385055 81 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 PDCL2P1-201ENST00000419302 352 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.24□□□□□ -2.05
RAD9AQ99638 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.24□□□□□ -2.05
RAD9AQ99638 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.24□□□□□ -2.05
RAD9AQ99638 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AC016632.1-201ENST00000503994 196 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 PTP4A1P4-201ENST00000512479 322 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 MIR548S-201ENST00000581352 82 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 AC018889.1-201ENST00000605372 397 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 AC019193.3-201ENST00000609144 554 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 MIR8076-201ENST00000611401 83 ntBASIC2.24□□□□□ -2.05
RAD9AQ99638 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RAD9AQ99638 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
RAD9AQ99638 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC092268.1-201ENST00000342691 405 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 snoU2_19.1-201ENST00000362361 80 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 Y_RNA.226-201ENST00000364337 114 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 SNORD81.2-201ENST00000365153 76 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 MIR561-201ENST00000385216 97 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AL590135.1-201ENST00000422215 156 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC019205.3-201ENST00000424573 156 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC016700.2-201ENST00000446011 156 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.23□□□□□ -2.05
RAD9AQ99638 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AL353752.1-201ENST00000454946 260 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC104564.1-201ENST00000493028 407 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC015911.1-201ENST00000495111 156 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 HMGB1P35-201ENST00000503360 598 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 MTND5P5-201ENST00000503764 376 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.23□□□□□ -2.05
RAD9AQ99638 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 CBX3P7-201ENST00000532876 502 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AL121579.1-201ENST00000555129 305 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC078795.3-201ENST00000602913 472 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AC124303.1-201ENST00000605703 360 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 uc_338.5-201ENST00000611839 155 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 AL355073.2-201ENST00000612106 557 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 MIR6128-201ENST00000615528 109 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.23□□□□□ -2.05
RAD9AQ99638 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 SNORD98-201ENST00000636377 67 ntBASIC2.23□□□□□ -2.05
RAD9AQ99638 Y_RNA.123-201ENST00000363338 102 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 Y_RNA.184-201ENST00000363884 108 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 RNU6-142P-201ENST00000384019 107 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 RNU6-306P-201ENST00000384617 107 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 SNORA40.18-201ENST00000391200 128 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 MIR548K-201ENST00000408406 116 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 MIR548F5-201ENST00000408421 86 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.22□□□□□ -2.05
RAD9AQ99638 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.22□□□□□ -2.05
RAD9AQ99638 AC074085.1-201ENST00000413598 418 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 Z82205.1-201ENST00000428456 297 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 AL353572.1-201ENST00000442490 417 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 GPM6BP3-201ENST00000442797 145 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAD9AQ99638 AC103851.1-201ENST00000506833 274 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 SNORA31.16-201ENST00000516773 139 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 RNU1-54P-201ENST00000517181 120 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.22□□□□□ -2.05
RAD9AQ99638 CYCSP26-201ENST00000534107 320 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.22□□□□□ -2.05
RAD9AQ99638 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.22□□□□□ -2.05
RAD9AQ99638 POLR3GP2-201ENST00000588366 668 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.22□□□□□ -2.05
RAD9AQ99638 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.22□□□□□ -2.05
RAD9AQ99638 SNORA43.4-201ENST00000629559 138 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
RAD9AQ99638 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms